RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ID4P47928 161 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 LSSP48449 732 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 DNM2P50570 870 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 CLCN7P51798 805 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 GTF2A2P52657 109 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 RBM10P98175 930 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 ARHGAP44Q17R89 818 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 NKPD1Q17RQ9 610 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 SKOR2Q2VWA4 1001 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 ATP13A4Q4VNC1 1196 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 TMEM177Q53S58 311 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 SYDE2Q5VT97 1194 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 IQSEC1Q6DN90 963 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 CYP2R1Q6VVX0 501 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 PRR23CQ6ZRP0 262 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 C16orf59Q7L2K0 433 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 WDR75Q8IWA0 830 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 CCAR1Q8IX12 1150 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 CNTD1Q8N815 330 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 NAT16Q8N8M0 369 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 SMC1BQ8NDV3 1235 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 CHAMP1Q96JM3 812 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 HSPA12BQ96MM6 686 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 GPR101Q96P66 508 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 SMAD5Q99717 465 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 METTL22Q9BUU2 404 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 CDADC1Q9BWV3 514 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 ATG3Q9NT62 314 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 AP5S1Q9NUS5 200 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 B4GALT6Q9UBX8 382 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 DUSP13Q9UII6 198 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 TIMM13Q9Y5L4 95 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 HMGXB3Q12766 1538 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 E2F8A0AVK6 867 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 CCDC66A2RUB6 948 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 WASH4PA8MWX3 477 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 H3BS24 57 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 WNT9AO14904 365 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 KIF3BO15066 747 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 FKTNO75072 461 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 ULK1O75385 1050 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 LTKP29376 864 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 ADCYAP1R1P41586 468 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 RAB27AP51159 221 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 KPNA1P52294 538 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 RPL11P62913 178 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 LSAMPQ13449 338 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 LAPTM5Q13571 262 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 CRY1Q16526 586 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 INF2Q27J81 1249 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 GAB4Q2WGN9 574 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 RGL3Q3MIN7 710 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 OVCH1Q7RTY7 1134 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 TMPRSS7Q7RTY8 843 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 ZBTB46Q86UZ6 589 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 CPNE8Q86YQ8 564 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 CHPFQ8IZ52 775 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 SHISA5Q8N114 240 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 C2orf69Q8N8R5 385 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 CHST14Q8NCH0 376 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 COG1Q8WTW3 980 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 TSR2Q969E8 191 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 CHMP4CQ96CF2 233 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 SCYL1Q96KG9 808 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 YIPF4Q9BSR8 244 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 MENTQ9BUN1 341 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 OSBPL1AQ9BXW6 950 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 TRIM8Q9BZR9 551 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 IPPKQ9H8X2 491 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 AASDHPPTQ9NRN7 309 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 SLC52A1Q9NWF4 448 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 THG1LQ9NWX6 298 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 TRHDEQ9UKU6 1024 aa4.28□□□□□ -1.72
TRAPPC11-205ENST00000506426 MROH2BQ7Z745 1585 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 THOC2Q8NI27 1593 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 BAZ1AQ9NRL2 1556 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 CCDC194A0A1B0GVG4 234 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 SHTN1A0MZ66 631 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 PTPDC1A2A3K4 754 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 AKAP10O43572 662 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 NPHS1O60500 1241 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 FBXO21O94952 628 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 MAP4K4O95819 1239 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 CEACAM5P06731 702 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 YBX3P16989 372 aaKnown RBP eCLIP4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 FSTP19883 344 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 GRK2P25098 689 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 RPL10P27635 214 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 GRK3P35626 688 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 TXKP42681 527 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 CD97P48960 835 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 MECP2P51608 486 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 IRAK1P51617 712 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 NFIAQ12857 509 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 HLA-DQA1Q5Y7H0 255 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 CREG2Q8IUH2 290 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 SPACA3Q8IXA5 215 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 FAM181AQ8N9Y4 354 aa4.27□□□□□ -1.73
TRAPPC11-205ENST00000506426 CHTF18Q8WVB6 975 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms