RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 APOA5Q6Q788 366 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 CATIPQ7Z7H3 387 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 RAB11FIP4Q86YS3 637 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 FBXO16Q8IX29 292 aaPredicted RBP18.2■□□□□ 0.5
PDCD6-203ENST00000505526 ZNF654Q8IZM8 581 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 CHMP4CQ96CF2 233 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 VWCEQ96DN2 955 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 GMCL1Q96IK5 515 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 MYL10Q9BUA6 226 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 NCOR1O75376 2440 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 CHD7Q9P2D1 2997 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 LRRC37A2A6NM11 1700 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 GOLGA8BA8MQT2 603 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
PDCD6-203ENST00000505526 ANP32AP39687 249 aaKnown RBP18.2■□□□□ 0.5
PDCD6-203ENST00000505526 SLC1A4P43007 532 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 TFF2Q03403 129 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 TMEM63BQ5T3F8 832 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 SYNE3Q6ZMZ3 975 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 MICU3Q86XE3 530 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 CYP39A1Q9NYL5 469 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 MTMR7Q9Y216 660 aa18.2■□□□□ 0.5
PDCD6-203ENST00000505526 ZBTB43O43298 467 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 LARGE1O95461 756 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 RXRAP19793 462 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 PDIA3P30101 505 aaKnown RBP18.19■□□□□ 0.5
PDCD6-203ENST00000505526 STK3Q13188 491 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 SKIV2LQ15477 1246 aaKnown RBP18.19■□□□□ 0.5
PDCD6-203ENST00000505526 ME3Q16798 604 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 AAK1Q2M2I8 961 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 MUM1L1Q5H9M0 696 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 FAM122AQ96E09 287 aa18.19■□□□□ 0.5
PDCD6-203ENST00000505526 ZNF274Q96GC6 653 aaPredicted RBP18.19■□□□□ 0.5
PDCD6-203ENST00000505526 DDAH1O94760 285 aa18.18■□□□□ 0.5
PDCD6-203ENST00000505526 PFKMP08237 780 aa18.18■□□□□ 0.5
PDCD6-203ENST00000505526 SNAP25P60880 206 aa18.18■□□□□ 0.5
PDCD6-203ENST00000505526 TROAPQ12815 778 aa18.18■□□□□ 0.5
PDCD6-203ENST00000505526 TTLL4Q14679 1199 aa18.18■□□□□ 0.5
PDCD6-203ENST00000505526 C1QTNF1Q9BXJ1 281 aa18.18■□□□□ 0.5
PDCD6-203ENST00000505526 VTA1Q9NP79 307 aa18.18■□□□□ 0.5
PDCD6-203ENST00000505526 K7ELQ4 463 aaPredicted RBP18.17■□□□□ 0.5
PDCD6-203ENST00000505526 PLA2G6O60733 806 aa18.17■□□□□ 0.5
PDCD6-203ENST00000505526 SUPT20HL2P0C7V6 817 aa18.17■□□□□ 0.5
PDCD6-203ENST00000505526 KCNQ1P51787 676 aa18.17■□□□□ 0.5
PDCD6-203ENST00000505526 KCTD1Q719H9 257 aa18.17■□□□□ 0.5
PDCD6-203ENST00000505526 RASGRP2Q7LDG7 609 aa18.17■□□□□ 0.5
PDCD6-203ENST00000505526 DEFB128Q7Z7B8 93 aa18.17■□□□□ 0.5
PDCD6-203ENST00000505526 TMX3Q96JJ7 454 aa18.17■□□□□ 0.5
PDCD6-203ENST00000505526 ZSCAN31Q96LW9 406 aaPredicted RBP18.17■□□□□ 0.5
PDCD6-203ENST00000505526 TRMT13Q9NUP7 481 aaKnown RBP18.17■□□□□ 0.5
PDCD6-203ENST00000505526 GOLGA8AA7E2F4 631 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 RFXAPO00287 272 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 CA3P07451 260 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 CALM1P0DP23 149 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 CALM2P0DP24 149 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 CALM3P0DP25 149 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 CYP2C9P11712 490 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 POU3F3P20264 500 aaPredicted RBP18.16■□□□□ 0.5
PDCD6-203ENST00000505526 METAP2P50579 478 aaKnown RBP eCLIP18.16■□□□□ 0.5
PDCD6-203ENST00000505526 CCT2P78371 535 aaKnown RBP18.16■□□□□ 0.5
PDCD6-203ENST00000505526 NSMFQ6X4W1 530 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 NECAB1Q8N987 351 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 MORC4Q8TE76 937 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
PDCD6-203ENST00000505526 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
PDCD6-203ENST00000505526 SH2B1Q9NRF2 756 aaPredicted RBP18.16■□□□□ 0.5
PDCD6-203ENST00000505526 POLR3EQ9NVU0 708 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 PRR12Q9ULL5 1215 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 MTCH2Q9Y6C9 303 aa18.16■□□□□ 0.5
PDCD6-203ENST00000505526 TCF20Q9UGU0 1960 aaKnown RBP18.16■□□□□ 0.5
PDCD6-203ENST00000505526 GTPBP6O43824 516 aaPredicted RBP18.15■□□□□ 0.5
PDCD6-203ENST00000505526 PFKFB2O60825 505 aa18.15■□□□□ 0.5
PDCD6-203ENST00000505526 PDHBP11177 359 aa18.15■□□□□ 0.5
PDCD6-203ENST00000505526 RCAN1P53805 252 aa18.15■□□□□ 0.5
PDCD6-203ENST00000505526 DUSP28Q4G0W2 176 aa18.15■□□□□ 0.5
PDCD6-203ENST00000505526 CERS4Q9HA82 394 aa18.15■□□□□ 0.5
PDCD6-203ENST00000505526 CCPG1Q9ULG6 757 aa18.15■□□□□ 0.5
PDCD6-203ENST00000505526 ACTN1P12814 892 aa18.14■□□□□ 0.5
PDCD6-203ENST00000505526 PURAQ00577 322 aaKnown RBP18.14■□□□□ 0.5
PDCD6-203ENST00000505526 SCRN1Q12765 414 aa18.14■□□□□ 0.5
PDCD6-203ENST00000505526 BECN1Q14457 450 aa18.14■□□□□ 0.5
PDCD6-203ENST00000505526 RTN1Q16799 776 aa18.14■□□□□ 0.5
PDCD6-203ENST00000505526 FANCBQ8NB91 859 aa18.14■□□□□ 0.5
PDCD6-203ENST00000505526 CTCFLQ8NI51 663 aaPredicted RBP18.14■□□□□ 0.5
PDCD6-203ENST00000505526 WDR11Q9BZH6 1224 aa18.14■□□□□ 0.5
PDCD6-203ENST00000505526 NCOA5Q9HCD5 579 aaKnown RBP18.14■□□□□ 0.5
PDCD6-203ENST00000505526 NID2Q14112 1375 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 REV3LO60673 3130 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 MYL3P08590 195 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 GRM4Q14833 912 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 CCDC83Q8IWF9 413 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 DCAF4Q8WV16 495 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 GTF3C6Q969F1 213 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 MAP3K14Q99558 947 aa18.14■□□□□ 0.49
PDCD6-203ENST00000505526 XIRP2A4UGR9 3374 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 TRANK1O15050 2925 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 ICAM1P05362 532 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 PARP1P09874 1014 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms