RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 CD2APQ9Y5K6 639 aa12.65□□□□□ -0.38
NFKB1-205ENST00000505458 CTIFO43310 598 aaKnown RBP12.65□□□□□ -0.38
NFKB1-205ENST00000505458 HAS1Q92839 578 aa12.65□□□□□ -0.38
NFKB1-205ENST00000505458 MAF1Q9H063 256 aa12.65□□□□□ -0.38
NFKB1-205ENST00000505458 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
NFKB1-205ENST00000505458 CCDC175P0C221 793 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-205ENST00000505458 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 ETF1P62495 437 aaKnown RBP12.64□□□□□ -0.39
NFKB1-205ENST00000505458 SETQ01105 290 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-205ENST00000505458 FKBP15Q5T1M5 1219 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 CENPPQ6IPU0 288 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 ATAD5Q96QE3 1844 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 GNA14O95837 355 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 CXCL9Q07325 125 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 TUBB2AQ13885 445 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 FIGNQ5HY92 759 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 TMEM139Q8IV31 216 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 TUBB2BQ9BVA1 445 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
NFKB1-205ENST00000505458 CLRN2A0PK11 232 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
NFKB1-205ENST00000505458 RRP9O43818 475 aaKnown RBP12.63□□□□□ -0.39
NFKB1-205ENST00000505458 KRT26Q7Z3Y9 468 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 POTEMA6NI47 508 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
NFKB1-205ENST00000505458 DCAF15Q66K64 600 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 PPP2R2CQ9Y2T4 447 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 COL4A5P29400 1685 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L15C9J2P7 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L13C9JLJ4 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L11C9JVI0 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L18D6R9N7 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L22D6RA61 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L17D6RBQ6 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L19D6RCP7 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L20D6RJB6 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 EDIL3O43854 480 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 ZNF76P36508 570 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 EHHADHQ08426 723 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L24Q0WX57 530 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 MCM6Q14566 821 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 USP17L6PQ6QN14 398 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 ETNPPLQ8TBG4 499 aa12.63□□□□□ -0.39
NFKB1-205ENST00000505458 POLR3CQ9BUI4 534 aaPredicted RBP12.63□□□□□ -0.39
NFKB1-205ENST00000505458 MYMKA6NI61 221 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 RPA1P27694 616 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 UBXN1Q04323 297 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 MCF2L2Q86YR7 1114 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 USP14P54578 494 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 MYOCDQ8IZQ8 938 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 MB21D1Q8N884 522 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 NEK9Q8TD19 979 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 CEP63Q96MT8 703 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 PLIN2Q99541 437 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 GHRHRQ02643 423 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 DEFB132Q7Z7B7 95 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 CCDC84Q86UT8 332 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-205ENST00000505458 ZNF397Q8NF99 534 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-205ENST00000505458 DDX12PQ92771 950 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 WDR11Q9BZH6 1224 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 EDEM3Q9BZQ6 932 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 TUFT1Q9NNX1 390 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 ZNHIT6Q9NWK9 470 aaKnown RBP12.62□□□□□ -0.39
NFKB1-205ENST00000505458 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
NFKB1-205ENST00000505458 TAB2Q9NYJ8 693 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 MYO1AQ9UBC5 1043 aa12.62□□□□□ -0.39
NFKB1-205ENST00000505458 A0A1W2PQJ5 194 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 WNT10BO00744 389 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 TEX33O43247 280 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 RBL2Q08999 1139 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 HSP90AA4PQ58FG1 418 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 FAM26FQ5R3K3 315 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 ERO1AQ96HE7 468 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 KIAA1683Q9H0B3 1180 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 DNM3Q9UQ16 869 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
NFKB1-205ENST00000505458 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
NFKB1-205ENST00000505458 MTIF2P46199 727 aaKnown RBP12.61□□□□□ -0.39
NFKB1-205ENST00000505458 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 CNOT6LQ96LI5 555 aaKnown RBP12.61□□□□□ -0.39
NFKB1-205ENST00000505458 ERGIC2Q96RQ1 377 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-205ENST00000505458 FEZ1Q99689 392 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 TUBGCP2Q9BSJ2 902 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 L2HGDHQ9H9P8 463 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 PGAP2Q9UHJ9 254 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 EP400Q96L91 3159 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 PLA2G4BP0C869 781 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 KCNA4P22459 653 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 TUBB4BP68371 445 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 PPP2R3AQ06190 1150 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 USH1GQ495M9 461 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 PRR16Q569H4 304 aa12.61□□□□□ -0.39
NFKB1-205ENST00000505458 TXLNBQ8N3L3 684 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms