RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 USP17L6PQ6QN14 398 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 MXRA8Q9BRK3 442 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 VAV3Q9UKW4 847 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 BRCA2P51587 3418 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 FAM237AA0A1B0GTK4 181 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 NKRFO15226 690 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 ADAMTS4O75173 837 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 PDCP20941 246 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 PRPHP41219 470 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 NCAPG2Q86XI2 1143 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 NAP1L4Q99733 375 aaKnown RBP9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 OGDHLQ9ULD0 1010 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 PTCH2Q9Y6C5 1203 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 CPLX1O14810 134 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 FGD1P98174 961 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 CACNB2Q08289 660 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 KCTD2Q14681 263 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 UBE2SQ16763 222 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 KCNV1Q6PIU1 500 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 SLC43A3Q8NBI5 491 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 RALGAPA2Q2PPJ7 1873 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 TNPO2O14787 897 aaKnown RBP9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 LGR5O75473 907 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 GJA9P57773 515 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 SETQ01105 290 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 C1orf53Q5VUE5 145 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 HAS1Q92839 578 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 KCNN1Q92952 543 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 ABHD16BQ9H3Z7 469 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 KCNJ14Q9UNX9 436 aa9.48□□□□□ -0.89
CDC42SE2-208ENST00000505065 PSMD10O75832 226 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 CCND2P30279 289 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 ARHGAP4P98171 946 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 PPP2R5CQ13362 524 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 IQSEC1Q6DN90 963 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 HOMER1Q86YM7 354 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 VAT1LQ9HCJ6 419 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 AGO4Q9HCK5 861 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 SLC5A4Q9NY91 659 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 DDX41Q9UJV9 622 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 PGK2P07205 417 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 NR3C2P08235 984 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 COL6A1P12109 1028 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 SP2Q02086 613 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 ARHGAP1Q07960 439 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 DIS3L2Q8IYB7 885 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 CPXCR1Q8N123 301 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 C8orf76Q96K31 380 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 ZSCAN16Q9H4T2 348 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 TNRC18O15417 2968 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 STX6O43752 255 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 STBD1O95210 358 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 KIF22Q14807 665 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 SNX17Q15036 470 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 HYIQ5T013 277 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 TMEM87AQ8NBN3 555 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 CEP89Q96ST8 783 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 RMDN3Q96TC7 470 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 KIF3AQ9Y496 699 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 BTBD18B2RXH4 712 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 ARIH2O95376 493 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 NR5A1Q13285 461 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 DUSP28Q4G0W2 176 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 AFAP1L1Q8TED9 768 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 SMC3Q9UQE7 1217 aa9.47□□□□□ -0.89
CDC42SE2-208ENST00000505065 FAM205CA6NFA0 338 aa9.46□□□□□ -0.89
CDC42SE2-208ENST00000505065 HAS3O00219 553 aa9.46□□□□□ -0.89
CDC42SE2-208ENST00000505065 LAD1O00515 517 aa9.46□□□□□ -0.89
CDC42SE2-208ENST00000505065 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.89
CDC42SE2-208ENST00000505065 SESTD1Q86VW0 696 aa9.46□□□□□ -0.89
CDC42SE2-208ENST00000505065 POLR3EQ9NVU0 708 aa9.46□□□□□ -0.89
CDC42SE2-208ENST00000505065 CENPFP49454 3210 aa9.46□□□□□ -0.89
CDC42SE2-208ENST00000505065 SEPT4O43236 478 aa9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 ZSCAN22P10073 491 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 XBP1P17861 261 aa9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 HOXA13P31271 388 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 ATP2C1P98194 919 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 ITGB3BPQ13352 177 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 ACVR2BQ13705 512 aa9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 IL17AQ16552 155 aa9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 NONOQ15233 471 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 ANKRD35Q8N283 1001 aa9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 EMSYQ7Z589 1322 aa9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 IGSF9BQ9UPX0 1349 aa9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 MYH11P35749 1972 aa9.46□□□□□ -0.9
CDC42SE2-208ENST00000505065 A6NJR5 290 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 FIBPO43427 364 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 TRIM32Q13049 653 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 PKP1Q13835 747 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 ECM1Q16610 540 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 CEP55Q53EZ4 464 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 IGSF22Q8N9C0 903 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 ANKLE1Q8NAG6 615 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 RDM1Q8NG50 284 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 TBCKQ8TEA7 893 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 RIT2Q99578 217 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 TSEN34Q9BSV6 310 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms