RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 FUT2Q10981 343 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 TRIM29Q14134 588 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 C8orf34Q49A92 452 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 PRPF38BQ5VTL8 546 aaKnown RBP11.28□□□□□ -0.6
NR1I3-220ENST00000505005 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 KLHDC9Q8NEP7 349 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-220ENST00000505005 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 GPRASP2Q96D09 838 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 FGD4Q96M96 766 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 LLPHQ9BRT6 129 aaKnown RBP11.28□□□□□ -0.6
NR1I3-220ENST00000505005 KATNAL1Q9BW62 490 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 SENP6Q9GZR1 1112 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-220ENST00000505005 KATNBL1Q9H079 304 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 STARD7Q9NQZ5 370 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 TCEAL9Q9UHQ7 104 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
NR1I3-220ENST00000505005 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 DCDC2CA8MYV0 355 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 MEIS2O14770 477 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 DYNC1LI2O43237 492 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 PPP1R11O60927 126 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 PPFIA4O75335 1185 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 SUPT20HL2P0C7V6 817 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 EIF2AK2P19525 551 aaKnown RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 CDC27P30260 824 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 CCT2P78371 535 aaKnown RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 HMGN5P82970 282 aaKnown RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 PTPN11Q06124 597 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 FSCN1Q16658 493 aaKnown RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 NIPA1Q7RTP0 329 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 DHX37Q8IY37 1157 aaKnown RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 REXO1Q8N1G1 1221 aaKnown RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 SLC26A6Q9BXS9 759 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-220ENST00000505005 SYNRGQ9UMZ2 1314 aa11.27□□□□□ -0.61
NR1I3-220ENST00000505005 A0A0U1RQG5 324 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-220ENST00000505005 A6NJR5 290 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 STXBP3O00186 592 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
NR1I3-220ENST00000505005 CPA1P15085 419 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 HOXA13P31271 388 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-220ENST00000505005 ZNF76P36508 570 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 USP11P51784 963 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 ACLYP53396 1101 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 AK2P54819 239 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 NLRP5P59047 1200 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 SETQ01105 290 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-220ENST00000505005 NTRK3Q16288 839 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 KCNA10Q16322 511 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 DGKDQ16760 1214 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 GJC2Q5T442 439 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-220ENST00000505005 WWC2Q6AWC2 1192 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 SLC39A5Q6ZMH5 540 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 SEPT14Q6ZU15 432 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 FBXO16Q8IX29 292 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-220ENST00000505005 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-220ENST00000505005 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 PCDHA6Q9UN73 950 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 PCDHA8Q9Y5H6 950 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 MCM3APO60318 1980 aa11.26□□□□□ -0.61
NR1I3-220ENST00000505005 KIAA1217Q5T5P2 1943 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 NOP56O00567 594 aaKnown RBP11.25□□□□□ -0.61
NR1I3-220ENST00000505005 OPLAHO14841 1288 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 PGK1P00558 417 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 ASGR1P07306 291 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
NR1I3-220ENST00000505005 SMPD1P17405 629 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 TAL1P17542 331 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-220ENST00000505005 SNX17Q15036 470 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 SAFBQ15424 915 aaKnown RBP eCLIP11.25□□□□□ -0.61
NR1I3-220ENST00000505005 USP17L6PQ6QN14 398 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 FAM43BQ6ZT52 329 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-220ENST00000505005 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
NR1I3-220ENST00000505005 PPTC7Q8NI37 304 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 TBC1D5Q92609 795 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-220ENST00000505005 DDX41Q9UJV9 622 aaKnown RBP11.25□□□□□ -0.61
NR1I3-220ENST00000505005 FRMPD3Q5JV73 1810 aa11.25□□□□□ -0.61
NR1I3-220ENST00000505005 A0A1W2PPC1 479 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 A0A1W2PQ45 241 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-220ENST00000505005 A0A1W2PQY0 241 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 SPATA31C2B4DYI2 1134 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 PARNO95453 639 aaKnown RBP11.24□□□□□ -0.61
NR1I3-220ENST00000505005 CYP3A4P08684 503 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 GNAT1P11488 350 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 SLC35G1Q2M3R5 365 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 CCDC62Q6P9F0 684 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 METTL7BQ6UX53 244 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 ANKRD33Q7Z3H0 272 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 RAB11FIP4Q86YS3 637 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 DAGLBQ8NCG7 672 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms