RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 ALG1Q9BT22 464 aa4.61□□□□□ -1.67
RFC1-209ENST00000504974 MRPL4Q9BYD3 311 aaKnown RBP4.61□□□□□ -1.67
RFC1-209ENST00000504974 GPR27Q9NS67 375 aa4.61□□□□□ -1.67
RFC1-209ENST00000504974 PCDHA9Q9Y5H5 950 aa4.61□□□□□ -1.67
RFC1-209ENST00000504974 PCDHA8Q9Y5H6 950 aa4.61□□□□□ -1.67
RFC1-209ENST00000504974 TIMM13Q9Y5L4 95 aaPredicted RBP4.61□□□□□ -1.67
RFC1-209ENST00000504974 CADPSQ9ULU8 1353 aa4.61□□□□□ -1.67
RFC1-209ENST00000504974 OPA1O60313 960 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 EFCAB14O75071 495 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 CRTAMO95727 393 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 SRGAP2CP0DJJ0 459 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 FPR2P25090 351 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 GPR85P60893 370 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 KCNA10Q16322 511 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 BICRALQ6AI39 1079 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 CNNM4Q6P4Q7 775 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 GALNT18Q6P9A2 607 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 CEP68Q76N32 757 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 FGD2Q7Z6J4 655 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 KIAA0907Q7Z7F0 614 aaPredicted RBP4.6□□□□□ -1.67
RFC1-209ENST00000504974 NLRX1Q86UT6 975 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 ANKLE2Q86XL3 938 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 ZC3H7AQ8IWR0 971 aaKnown RBP4.6□□□□□ -1.67
RFC1-209ENST00000504974 NIM1KQ8IY84 436 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 PANK1Q8TE04 598 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 TMEM169Q96HH4 297 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 MAGEB10Q96LZ2 347 aaPredicted RBP4.6□□□□□ -1.67
RFC1-209ENST00000504974 KCNJ15Q99712 375 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 IRF2BPLQ9H1B7 796 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 GCM1Q9NP62 436 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 CD320Q9NPF0 282 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 CLDND1Q9NY35 253 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 FBXL7Q9UJT9 491 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 SBNO2Q9Y2G9 1366 aa4.6□□□□□ -1.67
RFC1-209ENST00000504974 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.59□□□□□ -1.67
RFC1-209ENST00000504974 ANKRD62A6NC57 917 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 C22orf46C9J442 243 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 NRDCO43847 1150 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 ZSCAN22P10073 491 aaPredicted RBP4.59□□□□□ -1.67
RFC1-209ENST00000504974 SDSP20132 328 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 EPHB3P54753 998 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 CYP4F8P98187 520 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 LSAMPQ13449 338 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 SSPNQ14714 243 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 NR0B2Q15466 257 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 KIZQ2M2Z5 673 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 FNDC3BQ53EP0 1204 aaKnown RBP4.59□□□□□ -1.67
RFC1-209ENST00000504974 FBLN7Q53RD9 439 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 DALRD3Q5D0E6 543 aaKnown RBP4.59□□□□□ -1.67
RFC1-209ENST00000504974 TMEM132EQ6IEE7 984 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 RSPO2Q6UXX9 243 aaPredicted RBP4.59□□□□□ -1.67
RFC1-209ENST00000504974 LBX2Q6XYB7 198 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 IRF2BP1Q8IU81 584 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 LILRA2Q8N149 483 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 LZTR1Q8N653 840 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.59□□□□□ -1.67
RFC1-209ENST00000504974 DPF3Q92784 378 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 NINJ1Q92982 152 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 MFSD3Q96ES6 412 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 TRMT2BQ96GJ1 504 aaKnown RBP4.59□□□□□ -1.67
RFC1-209ENST00000504974 ZNF552Q9H707 407 aaPredicted RBP4.59□□□□□ -1.67
RFC1-209ENST00000504974 PPARGC1AQ9UBK2 798 aaKnown RBP4.59□□□□□ -1.67
RFC1-209ENST00000504974 PLAAQ9Y263 795 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 NPFFR2Q9Y5X5 522 aa4.59□□□□□ -1.67
RFC1-209ENST00000504974 TCAF2A6NFQ2 919 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 SOD2P04179 222 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 MSL3P1P0C860 447 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 MYCLP1P12525 358 aaPredicted RBP4.58□□□□□ -1.68
RFC1-209ENST00000504974 GRK2P25098 689 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 CANXP27824 592 aaKnown RBP4.58□□□□□ -1.68
RFC1-209ENST00000504974 GRK3P35626 688 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 ARL4AP40617 200 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 NEK4P51957 841 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 GTF2A2P52657 109 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 DLG4P78352 724 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 MVKQ03426 396 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 PAK1Q13153 545 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 ZNF460Q14592 562 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 TRIM61Q5EBN2 209 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 RNF187Q5TA31 235 aaPredicted RBP4.58□□□□□ -1.68
RFC1-209ENST00000504974 CABP7Q86V35 215 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 GSTCDQ8NEC7 633 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 SCLYQ96I15 445 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 PPP1R16BQ96T49 567 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 ZFYVE21Q9BQ24 234 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 JAM3Q9BX67 310 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 SLC6A17Q9H1V8 727 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 RXFP1Q9HBX9 757 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 TRIM39Q9HCM9 518 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 PDLIM7Q9NR12 457 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 PLA2G2DQ9UNK4 145 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 COA3Q9Y2R0 106 aaPredicted RBP4.58□□□□□ -1.68
RFC1-209ENST00000504974 TNPO3Q9Y5L0 923 aaKnown RBP4.58□□□□□ -1.68
RFC1-209ENST00000504974 HCFC2Q9Y5Z7 792 aa4.58□□□□□ -1.68
RFC1-209ENST00000504974 NUAK1O60285 661 aa4.57□□□□□ -1.68
RFC1-209ENST00000504974 PPP1R11O60927 126 aaPredicted RBP4.57□□□□□ -1.68
RFC1-209ENST00000504974 RFPL3O75679 317 aa4.57□□□□□ -1.68
RFC1-209ENST00000504974 DNAJC8O75937 253 aaPredicted RBP4.57□□□□□ -1.68
RFC1-209ENST00000504974 NTRK1P04629 796 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms