RNA–Protein interactions for RNA: ENST00000504878.1

CCNH-203, Transcript of cyclin H, humanhuman

TSL 1 (best) BASIC

Gene CCNH, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-203ENST00000504878 USP17L6PQ6QN14 398 aa13.84□□□□□ -0.19
CCNH-203ENST00000504878 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
CCNH-203ENST00000504878 SEPT14Q6ZU15 432 aa13.84□□□□□ -0.19
CCNH-203ENST00000504878 ANKRD33Q7Z3H0 272 aa13.84□□□□□ -0.19
CCNH-203ENST00000504878 GPKOWQ92917 476 aaPredicted RBP eCLIP13.84□□□□□ -0.193e-6■■□□□ 12.5
CCNH-203ENST00000504878 UPF3BQ9BZI7 483 aaKnown RBP13.84□□□□□ -0.19
CCNH-203ENST00000504878 PDLIM7Q9NR12 457 aa13.84□□□□□ -0.19
CCNH-203ENST00000504878 NAP1L2Q9ULW6 460 aaPredicted RBP13.84□□□□□ -0.19
CCNH-203ENST00000504878 DOCK5Q9H7D0 1870 aa13.83□□□□□ -0.2
CCNH-203ENST00000504878 PQBP1O60828 265 aaKnown RBP13.83□□□□□ -0.2
CCNH-203ENST00000504878 CDK7P50613 346 aa13.83□□□□□ -0.2
CCNH-203ENST00000504878 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.2
CCNH-203ENST00000504878 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
CCNH-203ENST00000504878 HEATR3Q7Z4Q2 680 aa13.83□□□□□ -0.2
CCNH-203ENST00000504878 SH3RF1Q7Z6J0 888 aa13.83□□□□□ -0.2
CCNH-203ENST00000504878 OR6J1Q8NGC5 347 aa13.83□□□□□ -0.2
CCNH-203ENST00000504878 CYP46A1Q9Y6A2 500 aa13.83□□□□□ -0.2
CCNH-203ENST00000504878 GRIN2DO15399 1336 aa13.82□□□□□ -0.2
CCNH-203ENST00000504878 A0A0U1RQG5 324 aaPredicted RBP13.82□□□□□ -0.2
CCNH-203ENST00000504878 A6NJR5 290 aa13.82□□□□□ -0.2
CCNH-203ENST00000504878 MYCLP12524 364 aaPredicted RBP13.82□□□□□ -0.2
CCNH-203ENST00000504878 ARHGAP1Q07960 439 aa13.82□□□□□ -0.2
CCNH-203ENST00000504878 LY6KQ17RY6 165 aa13.82□□□□□ -0.2
CCNH-203ENST00000504878 ZFP91Q96JP5 570 aaPredicted RBP13.82□□□□□ -0.2
CCNH-203ENST00000504878 TOX2Q96NM4 488 aa13.82□□□□□ -0.2
CCNH-203ENST00000504878 PSTPIP2Q9H939 334 aa13.82□□□□□ -0.2
CCNH-203ENST00000504878 DDX41Q9UJV9 622 aaKnown RBP13.82□□□□□ -0.2
CCNH-203ENST00000504878 V9GY48 417 aaPredicted RBP13.82□□□□□ -0.2
CCNH-203ENST00000504878 CCDC196A0A1B0GTZ2 297 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 TRIM43BA6NCK2 446 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 ARVCFO00192 962 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 ZEB2O60315 1214 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 CABYRO75952 493 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 SEC24BO95487 1268 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 PDIA3P30101 505 aaKnown RBP13.81□□□□□ -0.2
CCNH-203ENST00000504878 CCND2P30279 289 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 BMP8BP34820 402 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 CPT1AP50416 773 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 MRPS9P82933 396 aaKnown RBP13.81□□□□□ -0.2
CCNH-203ENST00000504878 PURAQ00577 322 aaKnown RBP13.81□□□□□ -0.2
CCNH-203ENST00000504878 FAAP100Q0VG06 881 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 NTRK3Q16288 839 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 SLC43A3Q8NBI5 491 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 SMARCC2Q8TAQ2 1214 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 TRIM43Q96BQ3 446 aaPredicted RBP13.81□□□□□ -0.2
CCNH-203ENST00000504878 PRDM5Q9NQX1 630 aaPredicted RBP13.81□□□□□ -0.2
CCNH-203ENST00000504878 MRVI1Q9Y6F6 885 aa13.81□□□□□ -0.2
CCNH-203ENST00000504878 STXBP3O00186 592 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 GH1P01241 217 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 CLTBP09497 229 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 ITGB8P26012 769 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 ANAPC15P60006 121 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 PSMC6P62333 389 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
CCNH-203ENST00000504878 UBE2SQ16763 222 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 PPP1R18Q6NYC8 613 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 FAM126BQ8IXS8 530 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 CUL5Q93034 780 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 EMID1Q96A84 441 aaPredicted RBP13.8□□□□□ -0.2
CCNH-203ENST00000504878 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 IL17RAQ96F46 866 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 INPP4AQ96PE3 977 aaPredicted RBP13.8□□□□□ -0.2
CCNH-203ENST00000504878 POLR3EQ9NVU0 708 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 BARHL2Q9NY43 387 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 MROH7Q68CQ1 1323 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 DCDC2CA8MYV0 355 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 hCG_1984214I3L0E3 225 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 KIAA0355O15063 1070 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 NAPAP54920 295 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 SP2Q02086 613 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 ITGA7Q13683 1181 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 PFKFB3Q16875 520 aaPredicted RBP13.8□□□□□ -0.2
CCNH-203ENST00000504878 PCNX4Q63HM2 1172 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 ZNF713Q8N859 430 aaPredicted RBP13.8□□□□□ -0.2
CCNH-203ENST00000504878 AFG1LQ8WV93 481 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 NCOA5Q9HCD5 579 aaKnown RBP13.8□□□□□ -0.2
CCNH-203ENST00000504878 PRKAG2Q9UGJ0 569 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
CCNH-203ENST00000504878 A0A1W2PPC1 479 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 STAM2O75886 525 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 CD4P01730 458 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 MMP3P08254 477 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 MYL3P08590 195 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 UBA1P22314 1058 aaKnown RBP13.79□□□□□ -0.2
CCNH-203ENST00000504878 CCT2P78371 535 aaKnown RBP13.79□□□□□ -0.2
CCNH-203ENST00000504878 SEMA3FQ13275 785 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 PKN1Q16512 942 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 BRDTQ58F21 947 aaPredicted RBP13.79□□□□□ -0.2
CCNH-203ENST00000504878 PHKBQ93100 1093 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
CCNH-203ENST00000504878 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
CCNH-203ENST00000504878 PRPF3O43395 683 aaKnown RBP13.78□□□□□ -0.2
CCNH-203ENST00000504878 PPFIA3O75145 1194 aa13.78□□□□□ -0.2
CCNH-203ENST00000504878 TGFB3P10600 412 aa13.78□□□□□ -0.2
CCNH-203ENST00000504878 SCG2P13521 617 aa13.78□□□□□ -0.2
CCNH-203ENST00000504878 IFNAR1P17181 557 aa13.78□□□□□ -0.2
CCNH-203ENST00000504878 ICAM3P32942 547 aa13.78□□□□□ -0.2
CCNH-203ENST00000504878 FXR1P51114 621 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCNH-203ENST00000504878 MYSM1Q5VVJ2 828 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms