RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-208ENST00000504813 RRP36Q96EU6 259 aaKnown RBP17.01■□□□□ 0.31
CNBP-208ENST00000504813 IL17RAQ96F46 866 aa17.01■□□□□ 0.31
CNBP-208ENST00000504813 PDCD2LQ9BRP1 358 aa17.01■□□□□ 0.31
CNBP-208ENST00000504813 A6NJR5 290 aa17■□□□□ 0.31
CNBP-208ENST00000504813 GCOM1H8Y6P7 765 aaPredicted RBP17■□□□□ 0.31
CNBP-208ENST00000504813 EIF3JO75822 258 aaKnown RBP17■□□□□ 0.31
CNBP-208ENST00000504813 POLR2MP0CAP2 368 aa17■□□□□ 0.31
CNBP-208ENST00000504813 RAG1P15918 1043 aa17■□□□□ 0.31
CNBP-208ENST00000504813 KRT32Q14532 448 aa17■□□□□ 0.31
CNBP-208ENST00000504813 LY6KQ17RY6 165 aa17■□□□□ 0.31
CNBP-208ENST00000504813 RAB11FIP4Q86YS3 637 aa17■□□□□ 0.31
CNBP-208ENST00000504813 FANCBQ8NB91 859 aa17■□□□□ 0.31
CNBP-208ENST00000504813 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
CNBP-208ENST00000504813 POLR3EQ9NVU0 708 aa17■□□□□ 0.31
CNBP-208ENST00000504813 SNX14Q9Y5W7 946 aa17■□□□□ 0.31
CNBP-208ENST00000504813 TIMP1P01033 207 aa16.99■□□□□ 0.31
CNBP-208ENST00000504813 NEK4P51957 841 aa16.99■□□□□ 0.31
CNBP-208ENST00000504813 PSMC6P62333 389 aa16.99■□□□□ 0.31
CNBP-208ENST00000504813 PGM5Q15124 567 aa16.99■□□□□ 0.31
CNBP-208ENST00000504813 APOA5Q6Q788 366 aa16.99■□□□□ 0.31
CNBP-208ENST00000504813 SEZ6LQ9BYH1 1024 aa16.99■□□□□ 0.31
CNBP-208ENST00000504813 DOCK5Q9H7D0 1870 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 TLR3O15455 904 aaKnown RBP16.98■□□□□ 0.31
CNBP-208ENST00000504813 RGS20O76081 388 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 MYL3P08590 195 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 ARHGAP1Q07960 439 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 SHHQ15465 462 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 C9orf50Q5SZB4 431 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 VSIG10LQ86VR7 867 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 MICU3Q86XE3 530 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 IL31RAQ8NI17 732 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 SEC63Q9UGP8 760 aaKnown RBP16.98■□□□□ 0.31
CNBP-208ENST00000504813 DDX41Q9UJV9 622 aaKnown RBP16.98■□□□□ 0.31
CNBP-208ENST00000504813 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 FRMPD4Q14CM0 1322 aa16.98■□□□□ 0.31
CNBP-208ENST00000504813 HMGB1P09429 215 aaKnown RBP16.97■□□□□ 0.31
CNBP-208ENST00000504813 MYCLP12524 364 aaPredicted RBP16.97■□□□□ 0.31
CNBP-208ENST00000504813 PSMA5P28066 241 aa16.97■□□□□ 0.31
CNBP-208ENST00000504813 MCM2P49736 904 aa16.97■□□□□ 0.31
CNBP-208ENST00000504813 EPHB4P54760 987 aa16.97■□□□□ 0.31
CNBP-208ENST00000504813 BRDTQ58F21 947 aaPredicted RBP16.97■□□□□ 0.31
CNBP-208ENST00000504813 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
CNBP-208ENST00000504813 MTG1Q9BT17 334 aaPredicted RBP16.97■□□□□ 0.31
CNBP-208ENST00000504813 K7ELQ4 463 aaPredicted RBP16.96■□□□□ 0.31
CNBP-208ENST00000504813 B4GALT4O60513 344 aa16.96■□□□□ 0.31
CNBP-208ENST00000504813 KPNA6O60684 536 aa16.96■□□□□ 0.31
CNBP-208ENST00000504813 GH1P01241 217 aa16.96■□□□□ 0.31
CNBP-208ENST00000504813 MFSD5Q6N075 450 aa16.96■□□□□ 0.31
CNBP-208ENST00000504813 GPR153Q6NV75 609 aa16.96■□□□□ 0.31
CNBP-208ENST00000504813 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
CNBP-208ENST00000504813 TM6SF1Q9BZW5 370 aa16.96■□□□□ 0.31
CNBP-208ENST00000504813 PIK3CDO00329 1044 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 MEIS2O14770 477 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 HSP90AA1P07900 732 aaKnown RBP16.96■□□□□ 0.3
CNBP-208ENST00000504813 MMP3P08254 477 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 CPA1P15085 419 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 CCND2P30279 289 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 FPGSQ05932 587 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 CCDC82Q8N4S0 544 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 AFG1LQ8WV93 481 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 EMID1Q96A84 441 aaPredicted RBP16.96■□□□□ 0.3
CNBP-208ENST00000504813 JAKMIP1Q96N16 626 aaKnown RBP16.96■□□□□ 0.3
CNBP-208ENST00000504813 TRPV6Q9H1D0 765 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 MRVI1Q9Y6F6 885 aa16.96■□□□□ 0.3
CNBP-208ENST00000504813 hCG_1642624A0A1W2PR95 340 aa16.95■□□□□ 0.3
CNBP-208ENST00000504813 ZBTB43O43298 467 aa16.95■□□□□ 0.3
CNBP-208ENST00000504813 USP17L6PQ6QN14 398 aa16.95■□□□□ 0.3
CNBP-208ENST00000504813 ZFP91Q96JP5 570 aaPredicted RBP16.95■□□□□ 0.3
CNBP-208ENST00000504813 PPP1R12CQ9BZL4 782 aa16.95■□□□□ 0.3
CNBP-208ENST00000504813 ALDH8A1Q9H2A2 487 aaPredicted RBP16.95■□□□□ 0.3
CNBP-208ENST00000504813 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
CNBP-208ENST00000504813 CYP46A1Q9Y6A2 500 aa16.95■□□□□ 0.3
CNBP-208ENST00000504813 CNTNAP5Q8WYK1 1306 aa16.94■□□□□ 0.3
CNBP-208ENST00000504813 CASTP20810 708 aaKnown RBP16.94■□□□□ 0.3
CNBP-208ENST00000504813 MRPS9P82933 396 aaKnown RBP16.94■□□□□ 0.3
CNBP-208ENST00000504813 FUT2Q10981 343 aa16.94■□□□□ 0.3
CNBP-208ENST00000504813 NBPF20Q3BBV1 942 aa16.94■□□□□ 0.3
CNBP-208ENST00000504813 KCNV1Q6PIU1 500 aa16.94■□□□□ 0.3
CNBP-208ENST00000504813 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
CNBP-208ENST00000504813 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
CNBP-208ENST00000504813 TRIP12Q14669 1992 aaPredicted RBP16.93■□□□□ 0.3
CNBP-208ENST00000504813 KLF18A0A0U1RQI7 1052 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 TGFB3P10600 412 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 RCAN1P53805 252 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 SP2Q02086 613 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 LAMC2Q13753 1193 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 RTN1Q16799 776 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 SMARCC2Q8TAQ2 1214 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 GPKOWQ92917 476 aaPredicted RBP eCLIP16.93■□□□□ 0.38e-10■□□□□ 11.2
CNBP-208ENST00000504813 CUL5Q93034 780 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 HIPK3Q9H422 1215 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 SCN5AQ14524 2016 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 UMODL1Q5DID0 1318 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 TANC1Q9C0D5 1861 aa16.93■□□□□ 0.3
CNBP-208ENST00000504813 STAM2O75886 525 aa16.92■□□□□ 0.3
CNBP-208ENST00000504813 CD2BP2O95400 341 aaKnown RBP16.92■□□□□ 0.3
CNBP-208ENST00000504813 CSF2RAP15509 400 aa16.92■□□□□ 0.3
CNBP-208ENST00000504813 CDC27P30260 824 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms