RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CYP3A7P24462 503 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ADCY7P51828 1080 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 GUCY1B3Q02153 619 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 TRAF1Q13077 416 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 RESTQ13127 1097 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 AP3B2Q13367 1082 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 KCTD2Q14681 263 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CCDC62Q6P9F0 684 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 B3GNT9Q6UX72 402 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ARMCX2Q7L311 632 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 MCF2L2Q86YR7 1114 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 REXO1Q8N1G1 1221 aaKnown RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 MSL3Q8N5Y2 521 aaKnown RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 C4orf32Q8N8J7 132 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CCDC148Q8NFR7 591 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 RMDN3Q96TC7 470 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 TINF2Q9BSI4 451 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ANO3Q9BYT9 981 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 FOXP1Q9H334 677 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 BCAS3Q9H6U6 928 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 BIN2Q9UBW5 565 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 SMC3Q9UQE7 1217 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 UBIAD1Q9Y5Z9 338 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 KIAA0100Q14667 2235 aaKnown RBP5.66□□□□□ -1.5
LMNB1-208ENST00000504788 MEIS1O00470 390 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 DHX15O43143 795 aaKnown RBP5.66□□□□□ -1.5
LMNB1-208ENST00000504788 ARIH2O95376 493 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 BRD1O95696 1058 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 ELNP15502 786 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 CYP2B6P20813 491 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 CALML3P27482 149 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 GNA11P29992 359 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 CYP2C19P33261 490 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 RGS2P41220 211 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 MRPL12P52815 198 aaKnown RBP5.66□□□□□ -1.5
LMNB1-208ENST00000504788 PRMT2P55345 433 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 NKX3-2P78367 333 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 SP2Q02086 613 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 JAKMIP3Q5VZ66 844 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 PCNX4Q63HM2 1172 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 LARP1BQ659C4 914 aaKnown RBP5.66□□□□□ -1.5
LMNB1-208ENST00000504788 NSUN6Q8TEA1 469 aaKnown RBP5.66□□□□□ -1.5
LMNB1-208ENST00000504788 CCDC12Q8WUD4 166 aaPredicted RBP5.66□□□□□ -1.5
LMNB1-208ENST00000504788 WASF1Q92558 559 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 C8orf76Q96K31 380 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 BEGAINQ9BUH8 593 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 C6orf50Q9HD87 102 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 TELO2Q9Y4R8 837 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 TRIM17Q9Y577 477 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 SCN10AQ9Y5Y9 1956 aa5.66□□□□□ -1.5
LMNB1-208ENST00000504788 TNRC18O15417 2968 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 STX6O43752 255 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 ATP9AO75110 1047 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 FOSP01100 380 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 EIF2AK2P19525 551 aaKnown RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 ICAM3P32942 547 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 NLRP5P59047 1200 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 UBXN2AP68543 259 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 ARHGAP4P98171 946 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 AKAP17AQ02040 695 aaKnown RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 CACNB2Q08289 660 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 SPIRE1Q08AE8 756 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 PPP4R3AQ6IN85 833 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 FAM173BQ6P4H8 233 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 MOXD1Q6UVY6 613 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 CTU1Q7Z7A3 348 aaKnown RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 FCHSD1Q86WN1 690 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 NOSTRINQ8IVI9 506 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 TBCKQ8TEA7 893 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 ARMC5Q96C12 935 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 CHAMP1Q96JM3 812 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 ZFP91Q96JP5 570 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 IWS1Q96ST2 819 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 GLT8D2Q9H1C3 349 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 KCNMB3Q9NPA1 279 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 PAK6Q9NQU5 681 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 PDGFCQ9NRA1 345 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 COLQQ9Y215 455 aaPredicted RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 GNEQ9Y223 722 aaKnown RBP5.65□□□□□ -1.5
LMNB1-208ENST00000504788 IVNS1ABPQ9Y6Y0 642 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 ALPK3Q96L96 1907 aa5.65□□□□□ -1.5
LMNB1-208ENST00000504788 SPATA31C2B4DYI2 1134 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 SLC37A4O43826 429 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ADCY3O60266 1144 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 TDP2O95551 362 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 KCNA2P16389 499 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 KRT2P35908 639 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 USP11P51784 963 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 IRX5P78411 483 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 ITGB3BPQ13352 177 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 NBR1Q14596 966 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 INF2Q27J81 1249 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 PRAMEF19Q5SWL8 479 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 CCSAPQ6IQ19 270 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 FBXO46Q6PJ61 603 aaPredicted RBP5.64□□□□□ -1.51
LMNB1-208ENST00000504788 DPP9Q86TI2 863 aa5.64□□□□□ -1.51
LMNB1-208ENST00000504788 SPRYD3Q8NCJ5 442 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 234 ms