RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 UBXN2AP68543 259 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
TPM3-217ENST00000504663 MRPS9P82933 396 aaKnown RBP11.79□□□□□ -0.52
TPM3-217ENST00000504663 GAS2L3Q86XJ1 694 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 MCF2L2Q86YR7 1114 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 SMC1BQ8NDV3 1235 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 KCNV2Q8TDN2 545 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 GJA10Q969M2 543 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 MAF1Q9H063 256 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 ACAD9Q9H845 621 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 CYP39A1Q9NYL5 469 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 DDX25Q9UHL0 483 aaKnown RBP11.79□□□□□ -0.52
TPM3-217ENST00000504663 RABGAP1Q9Y3P9 1069 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 PDHXO00330 501 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 MSH4O15457 936 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 LONP1P36776 959 aaKnown RBP11.78□□□□□ -0.52
TPM3-217ENST00000504663 BAATQ14032 418 aaPredicted RBP11.78□□□□□ -0.52
TPM3-217ENST00000504663 RGMBQ6NW40 437 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 B3GNT9Q6UX72 402 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 RNF207Q6ZRF8 634 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 CHST13Q8NET6 341 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 PDCD2LQ9BRP1 358 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 NUP62CLQ9H1M0 184 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 MORF4L1Q9UBU8 362 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 VAV3Q9UKW4 847 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 UBIAD1Q9Y5Z9 338 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 ZSWIM8A7E2V4 1837 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 DOCK5Q9H7D0 1870 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 WDR81Q562E7 1941 aa11.78□□□□□ -0.52
TPM3-217ENST00000504663 SYCE3A1L190 88 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 FSD2A1L4K1 749 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 GOLGA6L4A6NEF3 574 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 MEIS1O00470 390 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 ZNF202O95125 648 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 ITGB5P18084 799 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 OSBPP22059 807 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 CDC25AP30304 524 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.53
TPM3-217ENST00000504663 PABPC4Q13310 644 aaKnown RBP eCLIP11.77□□□□□ -0.53
TPM3-217ENST00000504663 PGM5Q15124 567 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 CALCRLQ16602 461 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 LONRF3Q496Y0 759 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 NAALADL2Q58DX5 795 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 PCNX4Q63HM2 1172 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 SH3RF1Q7Z6J0 888 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 SLC5A5Q92911 643 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.53
TPM3-217ENST00000504663 TIGD1Q96MW7 591 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 ZIC5Q96T25 663 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 NAP1L4Q99733 375 aaKnown RBP11.77□□□□□ -0.53
TPM3-217ENST00000504663 NUDT12Q9BQG2 462 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 PAGR1Q9BTK6 254 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 PORCNQ9H237 461 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 KCNH3Q9ULD8 1083 aa11.77□□□□□ -0.53
TPM3-217ENST00000504663 MCM3APO60318 1980 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 DNAJC25-GNG10A0A024R161 153 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 POTEMA6NI47 508 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 TBX3O15119 743 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 FOXN1O15353 648 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 RGS20O76081 388 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 TOMM70O94826 608 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 ERCC3P19447 782 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 EDNRBP24530 442 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 SYKP43405 635 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 ERVK-9P63128 1117 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 ERVK-24P63145 666 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 FSTL1Q12841 308 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 NSMFQ6X4W1 530 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 DTHD1Q6ZMT9 781 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 KRBA2Q6ZNG9 492 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 PNMA5Q96PV4 448 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 MTRQ99707 1265 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 CCSER1Q9C0I3 900 aa11.76□□□□□ -0.53
TPM3-217ENST00000504663 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 PSMD10O75832 226 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 ARP10275 920 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 BCRP11274 1271 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 EIF2AK2P19525 551 aaKnown RBP11.75□□□□□ -0.53
TPM3-217ENST00000504663 ZNF157P51786 506 aaPredicted RBP11.75□□□□□ -0.53
TPM3-217ENST00000504663 CNTN2Q02246 1040 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 GRB10Q13322 594 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 PLS1Q14651 629 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 KARSQ15046 597 aaKnown RBP11.75□□□□□ -0.53
TPM3-217ENST00000504663 CAMK4Q16566 473 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 ECM1Q16610 540 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 CEP55Q53EZ4 464 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 PRR16Q569H4 304 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 LRSAM1Q6UWE0 723 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 NIPA1Q7RTP0 329 aa11.75□□□□□ -0.53
TPM3-217ENST00000504663 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
TPM3-217ENST00000504663 GTF3C2Q8WUA4 911 aaPredicted RBP11.75□□□□□ -0.53
TPM3-217ENST00000504663 AK8Q96MA6 479 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms