RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 TAF6LQ9Y6J9 622 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 A0A087X0B3 334 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 A0A1W2PQJ5 194 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 TCRBV16S1A1N1A0A5B0 115 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 C7orf72A4D263 438 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 LRRC10BA6NIK2 292 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 NOTOA8MTQ0 251 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 ARNTLO00327 626 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 STAT3P40763 770 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 BCL6P41182 706 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 ST5P78524 1137 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 NFKB2Q00653 900 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 PAK1Q13153 545 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 LSAMPQ13449 338 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 KIZQ2M2Z5 673 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 HSF5Q4G112 596 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 PIK3R6Q5UE93 754 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 MBLAC2Q68D91 279 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 LBX2Q6XYB7 198 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 DDX46Q7L014 1031 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 KRT26Q7Z3Y9 468 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 DDX53Q86TM3 631 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 NLRX1Q86UT6 975 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 TMEM52Q8NDY8 209 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 DDX1Q92499 740 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 LIN37Q96GY3 246 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 CLDND1Q9NY35 253 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 MAPRE3Q9UPY8 281 aa6.9□□□□□ -1.3
TRAPPC13-205ENST00000504243 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 DNM2P50570 870 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 GTF2A2P52657 109 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 MLANAQ16655 118 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 IRF2BP1Q8IU81 584 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 SHISA4Q96DD7 197 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 TMEM169Q96HH4 297 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 WNK4Q96J92 1243 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 KCNJ15Q99712 375 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 BRINP2Q9C0B6 783 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 SAMD15Q9P1V8 674 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 GULP1Q9UBP9 304 aa6.89□□□□□ -1.31
TRAPPC13-205ENST00000504243 GSG1L2A8MUP6 293 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 SOD2P04179 222 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 PNLIPP16233 465 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 ARL4AP40617 200 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 AMPD3Q01432 767 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 SART3Q15020 963 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 TESK1Q15569 626 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 FAM47CQ5HY64 1035 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 CDCA2Q69YH5 1023 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 CEP68Q76N32 757 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 IGSF22Q8N9C0 903 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 ATL2Q8NHH9 583 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 TRMT2BQ96GJ1 504 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 JMJD8Q96S16 334 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 CATSPERZQ9NTU4 200 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 ACSL6Q9UKU0 697 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 RWDD3Q9Y3V2 267 aa6.88□□□□□ -1.31
TRAPPC13-205ENST00000504243 FAM47E-STBD1D6RA91 191 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 GSTA4O15217 222 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 FARP2O94887 1054 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 FUCA1P04066 466 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 CPEP16870 476 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 GRK2P25098 689 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 GRK3P35626 688 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 CEBPAP49715 358 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 CORO7P57737 925 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 STRN3Q13033 797 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 PCBP1Q15365 356 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 ZCCHC8Q6NZY4 707 aaKnown RBP6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 POU5F2Q8N7G0 328 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 IPPKQ9H8X2 491 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 PPARGC1AQ9UBK2 798 aaKnown RBP6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 COQ6Q9Y2Z9 468 aa6.87□□□□□ -1.31
TRAPPC13-205ENST00000504243 PRKCAP17252 672 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 TACR1P25103 407 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 PDE6BP35913 854 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 CYP4F8P98187 520 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 OGFOD2Q6N063 350 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 PKN3Q6P5Z2 889 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 PRR23BQ6ZRT6 265 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 EP400NLQ6ZTU2 488 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 RNF180Q86T96 592 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 NUP43Q8NFH3 380 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 NLGN2Q8NFZ4 835 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 PCDH19Q8TAB3 1148 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 FBXW5Q969U6 566 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 PLCD4Q9BRC7 762 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 JAM3Q9BX67 310 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 EPB41L4BQ9H329 900 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 NSUN3Q9H649 340 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 IMPACTQ9P2X3 320 aa6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 MCM8Q9UJA3 840 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms