RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
COPS4-202ENST00000503682 FAM161BQ96MY7 647 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 NEK1Q96PY6 1258 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 PDCD2LQ9BRP1 358 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 MROH7Q68CQ1 1323 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 RGS20O76081 388 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 DDAH1O94760 285 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 CSF2RAP15509 400 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 FPGSQ05932 587 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 PGM5Q15124 567 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 FAM47CQ5HY64 1035 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 SLC43A3Q8NBI5 491 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 BCAS3Q9H6U6 928 aa11.8□□□□□ -0.52
COPS4-202ENST00000503682 TRMT13Q9NUP7 481 aaKnown RBP11.8□□□□□ -0.52
COPS4-202ENST00000503682 GBF1Q92538 1859 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 B4DLN1 442 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
COPS4-202ENST00000503682 TLR3O15455 904 aaKnown RBP11.79□□□□□ -0.52
COPS4-202ENST00000503682 POLR2MP0CAP2 368 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 CYP2C9P11712 490 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 LIFRP42702 1097 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 CPT1AP50416 773 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 MRPL12P52815 198 aaKnown RBP11.79□□□□□ -0.52
COPS4-202ENST00000503682 CCL23P55773 120 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 ARHGAP1Q07960 439 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 USP17L6PQ6QN14 398 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 C16orf59Q7L2K0 433 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 IWS1Q96ST2 819 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.79□□□□□ -0.52
COPS4-202ENST00000503682 DDX41Q9UJV9 622 aaKnown RBP11.79□□□□□ -0.52
COPS4-202ENST00000503682 BRPF3Q9ULD4 1205 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
COPS4-202ENST00000503682 A6NJR5 290 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 NKRFO15226 690 aaKnown RBP eCLIP11.78□□□□□ -0.52
COPS4-202ENST00000503682 EIF3JO75822 258 aaKnown RBP11.78□□□□□ -0.52
COPS4-202ENST00000503682 CABYRO75952 493 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 NEFLP07196 543 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 KIF5BP33176 963 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 EXOSC10Q01780 885 aaKnown RBP11.78□□□□□ -0.52
COPS4-202ENST00000503682 SP2Q02086 613 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 GHRHRQ02643 423 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 MFSD5Q6N075 450 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 RRP36Q96EU6 259 aaKnown RBP11.78□□□□□ -0.52
COPS4-202ENST00000503682 MTG1Q9BT17 334 aaPredicted RBP11.78□□□□□ -0.52
COPS4-202ENST00000503682 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 POLR3EQ9NVU0 708 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
COPS4-202ENST00000503682 GH1P01241 217 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 MMP3P08254 477 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 DHX32Q7L7V1 743 aaKnown RBP11.77□□□□□ -0.52
COPS4-202ENST00000503682 VSIG10LQ86VR7 867 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 TMTC2Q8N394 836 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 FANCBQ8NB91 859 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 SCLYQ96I15 445 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 RNPC3Q96LT9 517 aaKnown RBP11.77□□□□□ -0.52
COPS4-202ENST00000503682 MAP3K14Q99558 947 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 MTA3Q9BTC8 594 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.52
COPS4-202ENST00000503682 HIPK3Q9H422 1215 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 RTEL1Q9NZ71 1219 aa11.77□□□□□ -0.52
COPS4-202ENST00000503682 NAP1L2Q9ULW6 460 aaPredicted RBP11.77□□□□□ -0.52
COPS4-202ENST00000503682 TET1Q8NFU7 2136 aa11.77□□□□□ -0.53
COPS4-202ENST00000503682 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
COPS4-202ENST00000503682 FAM109BQ6ICB4 259 aaPredicted RBP11.77□□□□□ -0.53
COPS4-202ENST00000503682 APOA5Q6Q788 366 aa11.77□□□□□ -0.53
COPS4-202ENST00000503682 WNT8AQ9H1J5 351 aa11.77□□□□□ -0.53
COPS4-202ENST00000503682 SEC63Q9UGP8 760 aaKnown RBP11.77□□□□□ -0.53
COPS4-202ENST00000503682 TELO2Q9Y4R8 837 aa11.77□□□□□ -0.53
COPS4-202ENST00000503682 SNX14Q9Y5W7 946 aa11.77□□□□□ -0.53
COPS4-202ENST00000503682 GRXCR1A8MXD5 290 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 MEIS2O14770 477 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 ZNF286BP0CG31 522 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 UBE2SQ16763 222 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 TMEM240Q5SV17 173 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 ZNF365Q70YC5 407 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 SGMS1Q86VZ5 419 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
COPS4-202ENST00000503682 SMARCC2Q8TAQ2 1214 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 KAT2BQ92831 832 aa11.76□□□□□ -0.53
COPS4-202ENST00000503682 JAKMIP1Q96N16 626 aaKnown RBP11.76□□□□□ -0.53
COPS4-202ENST00000503682 NOC4LQ9BVI4 516 aaKnown RBP11.76□□□□□ -0.53
COPS4-202ENST00000503682 KLF18A0A0U1RQI7 1052 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 GGPS1O95749 300 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 CALM1P0DP23 149 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 CALM2P0DP24 149 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 CALM3P0DP25 149 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 UBA1P22314 1058 aaKnown RBP11.75□□□□□ -0.53
COPS4-202ENST00000503682 CDC27P30260 824 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 CCND2P30279 289 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 GNAQP50148 359 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 APOBRQ0VD83 1088 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 HSDL1Q3SXM5 330 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
COPS4-202ENST00000503682 BRDTQ58F21 947 aaPredicted RBP11.75□□□□□ -0.53
COPS4-202ENST00000503682 Q6ZUG5 572 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms