RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 NSMFQ6X4W1 530 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 SHCBP1Q8NEM2 672 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 RASSF8Q8NHQ8 419 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 ERMNQ8TAM6 284 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 NSUN6Q8TEA1 469 aaKnown RBP9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 EPSTI1Q96J88 318 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 MS4A4AQ96JQ5 239 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 P2RX7Q99572 595 aaKnown RBP9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 NT5C3AQ9H0P0 336 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 TTC12Q9H892 705 aaPredicted RBP9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 DISC1Q9NRI5 854 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 HOMER2Q9NSB8 354 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 KIAA1468Q9P260 1216 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 LRWD1Q9UFC0 647 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 UTRNP46939 3433 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 PARP14Q460N5 1801 aa9.17□□□□□ -0.94
TOPBP1-202ENST00000503338 PASKQ96RG2 1323 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 RLFQ13129 1914 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 LOC102724159A0A0B4J2E5 919 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 FSD2A1L4K1 749 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 TESPA1A2RU30 521 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 SMC2O95347 1197 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 MUTP22033 750 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 CCND2P30279 289 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 STAT6P42226 847 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 TECP42680 631 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 MRE11P49959 708 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 AMPD3Q01432 767 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 BAATQ14032 418 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 PWP2Q15269 919 aaKnown RBP9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 IL17AQ16552 155 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 SPECC1Q5M775 1068 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 CST9Q5W186 159 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 CABP7Q86V35 215 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 PLA2G4DQ86XP0 818 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 ETNPPLQ8TBG4 499 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 SMCR8Q8TEV9 937 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 TBC1D5Q92609 795 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 HAS1Q92839 578 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 CCDC102AQ96A19 550 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 CDK5RAP3Q96JB5 506 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 HHIPL1Q96JK4 782 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 CDHR1Q96JP9 859 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 IWS1Q96ST2 819 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 RMDN3Q96TC7 470 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 PARK7Q99497 189 aaKnown RBP9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 MXRA8Q9BRK3 442 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 GTPBP4Q9BZE4 634 aaKnown RBP9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 WDR11Q9BZH6 1224 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 LRRC27Q9C0I9 530 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 MROH8Q9H579 483 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 PXMP2Q9NR77 195 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 ANO10Q9NW15 660 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 CYP39A1Q9NYL5 469 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 STK17AQ9UEE5 414 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 ADD3Q9UEY8 706 aaKnown RBP9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 MRVI1Q9Y6F6 885 aa9.16□□□□□ -0.94
TOPBP1-202ENST00000503338 BTBD19C9JJ37 291 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 FAM86B1E9PN63 330 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 PDHXO00330 501 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 MEIS1O00470 390 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 ACTN4O43707 911 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 FAM86B2P0C5J1 330 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 TAL1P17542 331 aaPredicted RBP9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 ZNF157P51786 506 aaPredicted RBP9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 TYRO3Q06418 890 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 FMR1Q06787 632 aaKnown RBP eCLIP9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 POSTNQ15063 836 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 PGM5Q15124 567 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 STX1AQ16623 288 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 LONRF3Q496Y0 759 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 HYIQ5T013 277 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 RGMBQ6NW40 437 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 SLC30A10Q6XR72 485 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 SAPCD2Q86UD0 394 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 NLRX1Q86UT6 975 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 NCAPG2Q86XI2 1143 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 CKAP2LQ8IYA6 745 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 ANKRD35Q8N283 1001 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 PDILTQ8N807 584 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 TRIML1Q8N9V2 468 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 GPRC5AQ8NFJ5 357 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 LENG9Q96B70 501 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 DHX58Q96C10 678 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 RIT2Q99578 217 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 PDCD2LQ9BRP1 358 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 PAGR1Q9BTK6 254 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 FUCA2Q9BTY2 467 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 NAT10Q9H0A0 1025 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 A1CFQ9NQ94 594 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 JADE2Q9NQC1 790 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 BTBD7Q9P203 1132 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 TCEAL9Q9UHQ7 104 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 SERTAD1Q9UHV2 236 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 TUBE1Q9UJT0 475 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 RIPK3Q9Y572 518 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 UBIAD1Q9Y5Z9 338 aa9.15□□□□□ -0.94
TOPBP1-202ENST00000503338 MYH7BA7E2Y1 1941 aa9.15□□□□□ -0.95
TOPBP1-202ENST00000503338 TRPM7Q96QT4 1865 aa9.15□□□□□ -0.95
TOPBP1-202ENST00000503338 A0A0G2JMZ2 1700 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms