RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 LARSQ9P2J5 1176 aaKnown RBP11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 JRKLQ9Y4A0 524 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 FMN2Q9NZ56 1722 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 PLCB3Q01970 1234 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 C10orf76Q5T2E6 689 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 SLC17A8Q8NDX2 589 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 PDE11AQ9HCR9 933 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 RNF14Q9UBS8 474 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 PVALEFA0A1B0GWK0 134 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 PSMC2P35998 433 aaKnown RBP11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 APBA1Q02410 837 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 CYP4A11Q02928 519 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 TTC31Q49AM3 519 aaPredicted RBP11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 VTI1AQ96AJ9 217 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 QTRT2Q9H974 415 aaKnown RBP11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 AS3MTQ9HBK9 375 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 PIK3C2AO00443 1686 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 SERPING1P05155 500 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 CC2D2BQ6DHV5 1058 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 WDR11Q9BZH6 1224 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 EMILIN3Q9NT22 766 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 PCDHA13Q9Y5I0 950 aa11.82□□□□□ -0.52
LIMCH1-205ENST00000503057 KRIT1O00522 736 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 ZBTB5O15062 677 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 LMNB1P20700 586 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 PROM2Q8N271 834 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 DBNDD1Q9H9R9 158 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 GJA3Q9Y6H8 435 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 ATP2C2O75185 946 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 FOXP4Q8IVH2 680 aaPredicted RBP11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 CEP95Q96GE4 821 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 ANO3Q9BYT9 981 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 PCDHA6Q9UN73 950 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 PCDHA8Q9Y5H6 950 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 KCNB1Q14721 858 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 ZSCAN26Q16670 478 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 ARHGEF16Q5VV41 709 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 RAD54LQ92698 747 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 GDAP1L1Q96MZ0 367 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 H0YCG3 227 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 KCNQ2O43526 872 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 ATP2A2P16615 1042 aaKnown RBP11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 EIF4A3P38919 411 aaKnown RBP11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 STAT2P52630 851 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 FAM102BQ5T8I3 360 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 PAIP2Q9BPZ3 127 aaKnown RBP11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 SENP2Q9HC62 589 aa11.81□□□□□ -0.52
LIMCH1-205ENST00000503057 TRIM49BA6NDI0 452 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 KIF11P52732 1056 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 MYL7Q01449 175 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 POTEDQ86YR6 584 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 NEDD1Q8NHV4 660 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 ZNF577Q9BSK1 485 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 TRIM31Q9BZY9 425 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 CCPG1Q9ULG6 757 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 PEAK1Q9H792 1746 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 CALRP27797 417 aaKnown RBP11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 MNAT1P51948 309 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 GPSM2P81274 684 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 DPYDQ12882 1025 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 ODR4Q5SWX8 454 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 TMEM179Q6ZVK1 233 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 GJA10Q969M2 543 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 SPZ1Q9BXG8 430 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 A0A1B0GTH6 734 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 ALAS1P13196 640 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 ST3GAL1Q11201 340 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 A0A1W2PQC6 194 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 GDF11O95390 407 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 GNPTABQ3T906 1256 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 ZNF365Q70YC5 407 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 KRT27Q7Z3Y8 459 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 DPF2Q92785 391 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 MASTLQ96GX5 879 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 NACC1Q96RE7 527 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 IQCGQ9H095 443 aaKnown RBP11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 ABCB4P21439 1286 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 TRPC3Q13507 836 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 TAOK1Q7L7X3 1001 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 APBB1IPQ7Z5R6 666 aaPredicted RBP11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 SEPT12Q8IYM1 358 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 MAP3K14Q99558 947 aa11.8□□□□□ -0.52
LIMCH1-205ENST00000503057 NDC80O14777 642 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 EPHB4P54760 987 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 TXNRD1Q16881 649 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 FBXO33Q7Z6M2 555 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 CCDC105Q8IYK2 499 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 FAM186BQ8IYM0 893 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 KCNK9Q9NPC2 374 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 LIMA1Q9UHB6 759 aaKnown RBP11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 MOCS3O95396 460 aa11.79□□□□□ -0.52
LIMCH1-205ENST00000503057 HARSP12081 509 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms