RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 USP17L21D6R901 530 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 TRANK1O15050 2925 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 PPFIA3O75145 1194 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 SNAP25P60880 206 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 ATP8B2P98198 1209 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 TNFAIP2Q03169 654 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 SLC9C2Q5TAH2 1124 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 C12orf60Q5U649 245 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 TAPT1Q6NXT6 567 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 HFE2Q6ZVN8 426 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 NOL8Q76FK4 1167 aaKnown RBP6.12□□□□□ -1.43
GYPB-202ENST00000502664 TLK2Q86UE8 772 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 HERC6Q8IVU3 1022 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 FBXO16Q8IX29 292 aaPredicted RBP6.12□□□□□ -1.43
GYPB-202ENST00000502664 TMEM57Q8N5G2 664 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 FAM133AQ8N9E0 248 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 SSH3Q8TE77 659 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 CHMP4CQ96CF2 233 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 SLF1Q9BQI6 1058 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 TEX13BQ9BXU2 312 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 CRNKL1Q9BZJ0 848 aaKnown RBP6.12□□□□□ -1.43
GYPB-202ENST00000502664 ALDH8A1Q9H2A2 487 aaPredicted RBP6.12□□□□□ -1.43
GYPB-202ENST00000502664 UBE2ZQ9H832 354 aaPredicted RBP6.12□□□□□ -1.43
GYPB-202ENST00000502664 SUGCTQ9HAC7 445 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 SPC25Q9HBM1 224 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 TSHZ2Q9NRE2 1034 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 HOMER2Q9NSB8 354 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 HDAC5Q9UQL6 1122 aa6.12□□□□□ -1.43
GYPB-202ENST00000502664 F5H6K3 240 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 RNF225M0QZC1 329 aaPredicted RBP6.11□□□□□ -1.43
GYPB-202ENST00000502664 ANP32CO43423 234 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 MBD4O95243 580 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 NDUFB10O96000 172 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 IQCF3P0C7M6 154 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 TIMP2P16035 220 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 KCNA5P22460 613 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 SSTR3P32745 418 aaPredicted RBP6.11□□□□□ -1.43
GYPB-202ENST00000502664 DEFB103AP81534 67 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 KRT76Q01546 638 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 KLRC3Q07444 240 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 NNTQ13423 1086 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 C16orf86Q6ZW13 317 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 RASGRP2Q7LDG7 609 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 RPUSD2Q8IZ73 545 aaKnown RBP6.11□□□□□ -1.43
GYPB-202ENST00000502664 ANKRD35Q8N283 1001 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.11□□□□□ -1.43
GYPB-202ENST00000502664 IL1RAPL2Q9NP60 686 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 A1CFQ9NQ94 594 aaKnown RBP6.11□□□□□ -1.43
GYPB-202ENST00000502664 SWAP70Q9UH65 585 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 EXOC6BQ9Y2D4 811 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 NOP58Q9Y2X3 529 aaKnown RBP6.11□□□□□ -1.43
GYPB-202ENST00000502664 MYH8P13535 1937 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 GREB1LQ9C091 1923 aaPredicted RBP6.11□□□□□ -1.43
GYPB-202ENST00000502664 USP34Q70CQ2 3546 aa6.11□□□□□ -1.43
GYPB-202ENST00000502664 MUC6Q6W4X9 2439 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 TET1Q8NFU7 2136 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 ZNF536O15090 1300 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 TNKSO95271 1327 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 LCTP09848 1927 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 H3BQ06 376 aaPredicted RBP6.1□□□□□ -1.43
GYPB-202ENST00000502664 GOLIM4O00461 696 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 ATP2A1O14983 1001 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 PRKCSHP14314 528 aaPredicted RBP6.1□□□□□ -1.43
GYPB-202ENST00000502664 RASA1P20936 1047 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 COPB2P35606 906 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 LEXMQ3ZCV2 418 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 MUM1L1Q5H9M0 696 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 CTR9Q6PD62 1173 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.1□□□□□ -1.43
GYPB-202ENST00000502664 AACSQ86V21 672 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 CERS3Q8IU89 383 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 PRSS33Q8NF86 280 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 ARHGAP45Q92619 1136 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 FRAT1Q92837 279 aaPredicted RBP6.1□□□□□ -1.43
GYPB-202ENST00000502664 CCDC17Q96LX7 622 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 CTAGE1Q96RT6 745 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 SLC9A7Q96T83 725 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 DNAJC2Q99543 621 aaKnown RBP6.1□□□□□ -1.43
GYPB-202ENST00000502664 KLF16Q9BXK1 252 aaPredicted RBP6.1□□□□□ -1.43
GYPB-202ENST00000502664 BCL11AQ9H165 835 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 SH2D4AQ9H788 454 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 KANSL2Q9H9L4 492 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 SLC38A10Q9HBR0 1119 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 GOPCQ9HD26 462 aa6.1□□□□□ -1.43
GYPB-202ENST00000502664 IGSF3O75054 1194 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 CABYRO75952 493 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 MYL3P08590 195 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 WDR4P57081 412 aaKnown RBP6.09□□□□□ -1.43
GYPB-202ENST00000502664 WDR5P61964 334 aaKnown RBP6.09□□□□□ -1.43
GYPB-202ENST00000502664 USP46P62068 366 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 PURAQ00577 322 aaKnown RBP6.09□□□□□ -1.43
GYPB-202ENST00000502664 NBPF20Q3BBV1 942 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 FAM117BQ6P1L5 589 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 KIAA1211Q6ZU35 1233 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 LRRC47Q8N1G4 583 aaKnown RBP6.09□□□□□ -1.43
GYPB-202ENST00000502664 PRPF38AQ8NAV1 312 aaKnown RBP6.09□□□□□ -1.43
GYPB-202ENST00000502664 PHOSPHO2Q8TCD6 241 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 COPS5Q92905 334 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 C17orf80Q9BSJ5 609 aa6.09□□□□□ -1.43
GYPB-202ENST00000502664 FTOQ9C0B1 505 aaKnown RBP eCLIP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms