RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 EHHADHQ08426 723 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 MAN2A1Q16706 1144 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 PODNQ7Z5L7 613 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 CCDC84Q86UT8 332 aaPredicted RBP18.43■□□□□ 0.54
VCAN-204ENST00000502527 HNRNPLLQ8WVV9 542 aaKnown RBP18.43■□□□□ 0.54
VCAN-204ENST00000502527 JAKMIP2Q96AA8 810 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 ZDHHC15Q96MV8 337 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 TSG101Q99816 390 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 NDST4Q9H3R1 872 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 RAB21Q9UL25 225 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 PCDHA12Q9UN75 941 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
VCAN-204ENST00000502527 KDM3AQ9Y4C1 1321 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 KCNK18Q7Z418 384 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 DCAF4Q8WV16 495 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 MASTLQ96GX5 879 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 MRIQ9BWK5 157 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 NT5C3AQ9H0P0 336 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 ST7Q9NRC1 585 aa18.43■□□□□ 0.54
VCAN-204ENST00000502527 BMP2KQ9NSY1 1161 aaPredicted RBP18.43■□□□□ 0.54
VCAN-204ENST00000502527 TUBBP07437 444 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 MKL1Q969V6 931 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 NYAP2Q9P242 653 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 ANKRD31Q8N7Z5 1873 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 SLC26A4O43511 780 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 ERLIN1O75477 346 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 SASH3O75995 380 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 HNRNPH3P31942 346 aaKnown RBP18.42■□□□□ 0.54
VCAN-204ENST00000502527 LONRF2Q1L5Z9 754 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 HYIQ5T013 277 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 TRAPPC11Q7Z392 1133 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 FUT8Q9BYC5 575 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 KANSL2Q9H9L4 492 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 SIK3Q9Y2K2 1263 aa18.42■□□□□ 0.54
VCAN-204ENST00000502527 SLC1A4P43007 532 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 USP11P51784 963 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 ECM1Q16610 540 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 QRICH1Q2TAL8 776 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 MYOCDQ8IZQ8 938 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 CCDC42Q96M95 316 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 UBXN6Q9BZV1 441 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 DNAJC18Q9H819 358 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 PI4KBQ9UBF8 816 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 PLAGL2Q9UPG8 496 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 PCDHA1Q9Y5I3 950 aa18.41■□□□□ 0.54
VCAN-204ENST00000502527 EEF2P13639 858 aaKnown RBP18.4■□□□□ 0.54
VCAN-204ENST00000502527 SPA17Q15506 151 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 CERKLQ49MI3 558 aaPredicted RBP18.4■□□□□ 0.54
VCAN-204ENST00000502527 SLFN13Q68D06 897 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 LRRC55Q6ZSA7 311 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 DNAJC19Q96DA6 116 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 TSGA10Q9BZW7 698 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 NKRFO15226 690 aaKnown RBP eCLIP18.4■□□□□ 0.54
VCAN-204ENST00000502527 RAD21O60216 631 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 FKBP1AP62942 108 aaKnown RBP18.4■□□□□ 0.54
VCAN-204ENST00000502527 HDLBPQ00341 1268 aaKnown RBP18.4■□□□□ 0.54
VCAN-204ENST00000502527 COASYQ13057 564 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 PAPD7Q5XG87 772 aaKnown RBP18.4■□□□□ 0.54
VCAN-204ENST00000502527 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
VCAN-204ENST00000502527 DBNDD1Q9H9R9 158 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 PANK4Q9NVE7 773 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 SAR1BQ9Y6B6 198 aa18.4■□□□□ 0.54
VCAN-204ENST00000502527 GREB1LQ9C091 1923 aaPredicted RBP18.4■□□□□ 0.54
VCAN-204ENST00000502527 CYP3A7-CYP3A51PA0A087WV96 503 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L15C9J2P7 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L13C9JLJ4 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L11C9JVI0 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L18D6R9N7 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L22D6RA61 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L17D6RBQ6 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L19D6RCP7 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L20D6RJB6 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 TFRCP02786 760 aaKnown RBP18.39■□□□□ 0.53
VCAN-204ENST00000502527 CYP3A7P24462 503 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 HSPA1LP34931 641 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L24Q0WX57 530 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 KIF5AQ12840 1032 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 USP17L6PQ6QN14 398 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 PNKPQ96T60 521 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 IDI2Q9BXS1 227 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 TRIM34Q9BYJ4 488 aa18.39■□□□□ 0.53
VCAN-204ENST00000502527 ZHX1Q9UKY1 873 aaPredicted RBP18.39■□□□□ 0.53
VCAN-204ENST00000502527 VAV2P52735 878 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 TCP10Q12799 353 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 SMC1AQ14683 1233 aaKnown RBP18.38■□□□□ 0.53
VCAN-204ENST00000502527 LRRC41Q15345 812 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 CDC37Q16543 378 aaPredicted RBP18.38■□□□□ 0.53
VCAN-204ENST00000502527 FAM26FQ5R3K3 315 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 STRIP1Q5VSL9 837 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 MCTP2Q6DN12 878 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 NCAPH2Q6IBW4 605 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 GJA10Q969M2 543 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 ANO3Q9BYT9 981 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 LACRTQ9GZZ8 138 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 GBP3Q9H0R5 595 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 MMRN2Q9H8L6 949 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 FAM207AQ9NSI2 230 aaPredicted RBP18.38■□□□□ 0.53
VCAN-204ENST00000502527 TFR2Q9UP52 801 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 ANO9A1A5B4 782 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms