RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
CLDND1-206ENST00000502299 FCHSD1Q86WN1 690 aa16.56■□□□□ 0.24
CLDND1-206ENST00000502299 ZNF713Q8N859 430 aaPredicted RBP16.56■□□□□ 0.24
CLDND1-206ENST00000502299 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
CLDND1-206ENST00000502299 RNPC3Q96LT9 517 aaKnown RBP16.56■□□□□ 0.24
CLDND1-206ENST00000502299 PXMP2Q9NR77 195 aa16.56■□□□□ 0.24
CLDND1-206ENST00000502299 PDGFCQ9NRA1 345 aa16.56■□□□□ 0.24
CLDND1-206ENST00000502299 Q9Y3F1 56 aa16.56■□□□□ 0.24
CLDND1-206ENST00000502299 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 RBM47A0AV96 593 aaKnown RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 EIF3JO75822 258 aaKnown RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 NR3C2P08235 984 aa16.55■□□□□ 0.24
CLDND1-206ENST00000502299 SMPD1P17405 629 aa16.55■□□□□ 0.24
CLDND1-206ENST00000502299 EIF2AK2P19525 551 aaKnown RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 GJA9P57773 515 aa16.55■□□□□ 0.24
CLDND1-206ENST00000502299 AKAP17AQ02040 695 aaKnown RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 FAAP100Q0VG06 881 aa16.55■□□□□ 0.24
CLDND1-206ENST00000502299 LARP6Q9BRS8 491 aaKnown RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 TSEN34Q9BSV6 310 aaKnown RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 WDR11Q9BZH6 1224 aa16.55■□□□□ 0.24
CLDND1-206ENST00000502299 GNEQ9Y223 722 aaKnown RBP16.55■□□□□ 0.24
CLDND1-206ENST00000502299 SYNRGQ9UMZ2 1314 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 MEIS2O14770 477 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 CPLX1O14810 134 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 FOSL2P15408 326 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 RAG1P15918 1043 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 IFNAR1P17181 557 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 NEK4P51957 841 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 NTRK3Q16288 839 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 PFKFB3Q16875 520 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-206ENST00000502299 DUSP28Q4G0W2 176 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 WWC2Q6AWC2 1192 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 CCSAPQ6IQ19 270 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-206ENST00000502299 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
CLDND1-206ENST00000502299 USP17L6PQ6QN14 398 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 ANKRD33Q7Z3H0 272 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 PCSK9Q8NBP7 692 aaKnown RBP16.54■□□□□ 0.24
CLDND1-206ENST00000502299 KLHDC9Q8NEP7 349 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 SCFD2Q8WU76 684 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 GPKOWQ92917 476 aaPredicted RBP eCLIP16.54■□□□□ 0.24
CLDND1-206ENST00000502299 PDCD2LQ9BRP1 358 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 RNF26Q9BY78 433 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-206ENST00000502299 AP5M1Q9H0R1 490 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 UPF3AQ9H1J1 476 aaKnown RBP16.54■□□□□ 0.24
CLDND1-206ENST00000502299 TMEM39AQ9NV64 488 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 LCTP09848 1927 aa16.54■□□□□ 0.24
CLDND1-206ENST00000502299 MCM3APO60318 1980 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
CLDND1-206ENST00000502299 DYNC1LI2O43237 492 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-206ENST00000502299 ADCY6O43306 1168 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 C6orf222P0C671 652 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-206ENST00000502299 MYCLP12524 364 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-206ENST00000502299 CST5P28325 142 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-206ENST00000502299 ACLYP53396 1101 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 NAPAP54920 295 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 NKX3-2P78367 333 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 IRX5P78411 483 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-206ENST00000502299 FPGSQ05932 587 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 TTLL4Q14679 1199 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 GRIN2CQ14957 1233 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 PGM5Q15124 567 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 TOX2Q96NM4 488 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 C22orf23Q9BZE7 217 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-206ENST00000502299 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
CLDND1-206ENST00000502299 BARHL2Q9NY43 387 aa16.53■□□□□ 0.24
CLDND1-206ENST00000502299 TMEM265A0A087WTH1 108 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 MYADML2A6NDP7 307 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 MOXD2PA6NHM9 499 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 TXNP10599 105 aaKnown RBP16.52■□□□□ 0.24
CLDND1-206ENST00000502299 SCG2P13521 617 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 AK2P54819 239 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 STK3Q13188 491 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 KCNA10Q16322 511 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 GNASQ5JWF2 1037 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 SEPT14Q6ZU15 432 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 TLK2Q86UE8 772 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 TRIM22Q8IYM9 498 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 PHKBQ93100 1093 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 NCOA5Q9HCD5 579 aaKnown RBP16.52■□□□□ 0.24
CLDND1-206ENST00000502299 STARD7Q9NQZ5 370 aa16.52■□□□□ 0.24
CLDND1-206ENST00000502299 SMCO2A6NFE2 343 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 STXBP3O00186 592 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 ZEB2O60315 1214 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 CCND2P30279 289 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 SSRP1Q08945 709 aaKnown RBP16.51■□□□□ 0.23
CLDND1-206ENST00000502299 PKN1Q16512 942 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 XRRA1Q6P2D8 792 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 KCNV1Q6PIU1 500 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 C16orf59Q7L2K0 433 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 CCDC12Q8WUD4 166 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-206ENST00000502299 SLC26A6Q9BXS9 759 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 TBX21Q9UL17 535 aa16.51■□□□□ 0.23
CLDND1-206ENST00000502299 TPCN1Q9ULQ1 816 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms