RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 LRRC8DQ7L1W4 858 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 SESTD1Q86VW0 696 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 TBC1D10CQ8IV04 446 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 CCDC155Q8N6L0 562 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 GDPD5Q8WTR4 605 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 ZBED2Q9BTP6 218 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 MYO7AQ13402 2215 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 ZMYM6O95789 1325 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 KAT6AQ92794 2004 aa17.18■□□□□ 0.34
SEC61A1-207ENST00000498837 NBNO60934 754 aa17.17■□□□□ 0.34
SEC61A1-207ENST00000498837 CKBP12277 381 aa17.17■□□□□ 0.34
SEC61A1-207ENST00000498837 SELPP16109 830 aa17.17■□□□□ 0.34
SEC61A1-207ENST00000498837 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
SEC61A1-207ENST00000498837 CNKSR3Q6P9H4 555 aa17.17■□□□□ 0.34
SEC61A1-207ENST00000498837 SYTL5Q8TDW5 730 aaPredicted RBP17.17■□□□□ 0.34
SEC61A1-207ENST00000498837 HDAC6Q9UBN7 1215 aa17.17■□□□□ 0.34
SEC61A1-207ENST00000498837 MTUS1Q9ULD2 1270 aa17.17■□□□□ 0.34
SEC61A1-207ENST00000498837 CXCL10P02778 98 aa17.16■□□□□ 0.34
SEC61A1-207ENST00000498837 CASTP20810 708 aaKnown RBP17.16■□□□□ 0.34
SEC61A1-207ENST00000498837 CDC37Q16543 378 aaPredicted RBP17.16■□□□□ 0.34
SEC61A1-207ENST00000498837 NSUN6Q8TEA1 469 aaKnown RBP17.16■□□□□ 0.34
SEC61A1-207ENST00000498837 ALG1Q9BT22 464 aa17.16■□□□□ 0.34
SEC61A1-207ENST00000498837 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
SEC61A1-207ENST00000498837 GTF2IRD1Q9UHL9 959 aa17.16■□□□□ 0.34
SEC61A1-207ENST00000498837 NEDD4P46934 1319 aa17.16■□□□□ 0.34
SEC61A1-207ENST00000498837 MUC6Q6W4X9 2439 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 PSEN2P49810 448 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 RBL2Q08999 1139 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 STXBP2Q15833 593 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 DGKDQ16760 1214 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 ADGRF4Q8IZF3 695 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 RMDN3Q96TC7 470 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 SUGCTQ9HAC7 445 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 CD320Q9NPF0 282 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 LMCD1Q9NZU5 365 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 DDX41Q9UJV9 622 aaKnown RBP17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 ABCB11O95342 1321 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
SEC61A1-207ENST00000498837 ATG2AQ2TAZ0 1938 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 GJB5O95377 273 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 PCP11498 1178 aaKnown RBP17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 ERVK-21P61565 698 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 ZNF200P98182 395 aaPredicted RBP17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 TMEM31Q5JXX7 168 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 FAM117BQ6P1L5 589 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 DGKHQ86XP1 1220 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 C7orf31Q8N865 590 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 PNMA1Q8ND90 353 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 ESR2Q92731 530 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 WNT8BQ93098 351 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 IWS1Q96ST2 819 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 RAD9AQ99638 391 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 C11orf16Q9NQ32 467 aa17.14■□□□□ 0.33
SEC61A1-207ENST00000498837 ABHD14A-ACY1A0A1B0GW23 586 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 LINC01553A4QN01 128 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 ZNF286BP0CG31 522 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 MBTPS1Q14703 1052 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 MFSD10Q14728 455 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 TRIM71Q2Q1W2 868 aaKnown RBP17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 QRICH1Q2TAL8 776 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 ZNF618Q5T7W0 954 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 TRAF7Q6Q0C0 670 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 TGS1Q96RS0 853 aaKnown RBP17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
SEC61A1-207ENST00000498837 FAM86C2PA6NEL3 165 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 TRIM6-TRIM34B2RNG4 842 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 HAS3O00219 553 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 KDM4AO75164 1064 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 NR3C2P08235 984 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 PTK7Q13308 1070 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 IKBKEQ14164 716 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 HIC1Q14526 733 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 FBXO11Q86XK2 927 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 MCF2L2Q86YR7 1114 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 MAF1Q9H063 256 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 JMJD4Q9H9V9 463 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 HCN4Q9Y3Q4 1203 aa17.12■□□□□ 0.33
SEC61A1-207ENST00000498837 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 ZNF213O14771 459 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 SORBS3O60504 671 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 GPR37L1O60883 481 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 EIF3JO75822 258 aaKnown RBP17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 F2P00734 622 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 CFBP00751 764 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.336e-21■■■■■ 34.4
SEC61A1-207ENST00000498837 TICAM2Q86XR7 235 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 EMID1Q96A84 441 aaPredicted RBP17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 KATNAL1Q9BW62 490 aa17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 UBE2ZQ9H832 354 aaPredicted RBP17.11■□□□□ 0.33
SEC61A1-207ENST00000498837 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms