RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SMCO2A6NFE2 343 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 SPDYE3A6NKU9 549 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 ARIH2O95376 493 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 LY6KQ17RY6 165 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 TRIM60Q495X7 471 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 CXCL17Q6UXB2 119 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 POLR3EQ9NVU0 708 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 BARHL2Q9NY43 387 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 RTEL1Q9NZ71 1219 aa14.71□□□□□ -0.05
HSPG2-213ENST00000498495 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
HSPG2-213ENST00000498495 CPLX1O14810 134 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 STAM2O75886 525 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 GH1P01241 217 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 MYL3P08590 195 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 SCG2P13521 617 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 TLE2Q04725 743 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 STK3Q13188 491 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 ANKRD1Q15327 319 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 NTRK3Q16288 839 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 UBE2SQ16763 222 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 PFKFB3Q16875 520 aaPredicted RBP14.7□□□□□ -0.06
HSPG2-213ENST00000498495 PPP1R18Q6NYC8 613 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 CPLX2Q6PUV4 134 aaKnown RBP14.7□□□□□ -0.06
HSPG2-213ENST00000498495 CHRDL2Q6WN34 429 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 IL31RAQ8NI17 732 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 PHKBQ93100 1093 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 GLT8D2Q9H1C3 349 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 ALDH8A1Q9H2A2 487 aaPredicted RBP14.7□□□□□ -0.06
HSPG2-213ENST00000498495 NCOA5Q9HCD5 579 aaKnown RBP14.7□□□□□ -0.06
HSPG2-213ENST00000498495 RIC8AQ9NPQ8 531 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 PCDHA6Q9UN73 950 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 PCDHA8Q9Y5H6 950 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 NID2Q14112 1375 aa14.7□□□□□ -0.06
HSPG2-213ENST00000498495 DCDC2CA8MYV0 355 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 STXBP3O00186 592 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 ARVCFO00192 962 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 KPNA6O60684 536 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 PQBP1O60828 265 aaKnown RBP14.69□□□□□ -0.06
HSPG2-213ENST00000498495 PPFIA3O75145 1194 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 RGS20O76081 388 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 TGFB3P10600 412 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 IFNAR1P17181 557 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 MRPS9P82933 396 aaKnown RBP14.69□□□□□ -0.06
HSPG2-213ENST00000498495 LAMC2Q13753 1193 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 GNPTABQ3T906 1256 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 C8orf34Q49A92 452 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 PCNX4Q63HM2 1172 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 TYW1BQ6NUM6 668 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 XRRA1Q6P2D8 792 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 TEX2Q8IWB9 1127 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 DHX37Q8IY37 1157 aaKnown RBP14.69□□□□□ -0.06
HSPG2-213ENST00000498495 CCDC12Q8WUD4 166 aaPredicted RBP14.69□□□□□ -0.06
HSPG2-213ENST00000498495 TOX2Q96NM4 488 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 SLC26A6Q9BXS9 759 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 RNF26Q9BY78 433 aaPredicted RBP14.69□□□□□ -0.06
HSPG2-213ENST00000498495 EHMT1Q9H9B1 1298 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 PRDM5Q9NQX1 630 aaPredicted RBP14.69□□□□□ -0.06
HSPG2-213ENST00000498495 COLQQ9Y215 455 aaPredicted RBP14.69□□□□□ -0.06
HSPG2-213ENST00000498495 LRRC37A2A6NM11 1700 aa14.69□□□□□ -0.06
HSPG2-213ENST00000498495 MROH7Q68CQ1 1323 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 ALPK3Q96L96 1907 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 A6NJR5 290 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 FOSP01100 380 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-213ENST00000498495 CDK7P50613 346 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 ADCY7P51828 1080 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 NEK4P51957 841 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 SSRP1Q08945 709 aaKnown RBP14.68□□□□□ -0.06
HSPG2-213ENST00000498495 ITGA7Q13683 1181 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 PKN1Q16512 942 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 ANKRD33Q7Z3H0 272 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 NLRX1Q86UT6 975 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 TRIM22Q8IYM9 498 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 AFG1LQ8WV93 481 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 IL17RAQ96F46 866 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 LBHD1Q9BQE6 289 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-213ENST00000498495 MTG1Q9BT17 334 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-213ENST00000498495 SEZ6LQ9BYH1 1024 aa14.68□□□□□ -0.06
HSPG2-213ENST00000498495 SLKQ9H2G2 1235 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-213ENST00000498495 FRMPD4Q14CM0 1322 aa14.67□□□□□ -0.06
HSPG2-213ENST00000498495 CLTBP09497 229 aa14.67□□□□□ -0.06
HSPG2-213ENST00000498495 AK2P54819 239 aa14.67□□□□□ -0.06
HSPG2-213ENST00000498495 PURAQ00577 322 aaKnown RBP14.67□□□□□ -0.06
HSPG2-213ENST00000498495 ARHGAP1Q07960 439 aa14.67□□□□□ -0.06
HSPG2-213ENST00000498495 MLXIPQ9HAP2 919 aa14.67□□□□□ -0.06
HSPG2-213ENST00000498495 C6orf50Q9HD87 102 aa14.67□□□□□ -0.06
HSPG2-213ENST00000498495 TMEM39AQ9NV64 488 aa14.67□□□□□ -0.06
HSPG2-213ENST00000498495 TPCN1Q9ULQ1 816 aa14.67□□□□□ -0.06
HSPG2-213ENST00000498495 SPATA31C2B4DYI2 1134 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 TLR3O15455 904 aaKnown RBP14.66□□□□□ -0.06
HSPG2-213ENST00000498495 FIBPO43427 364 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 GGPS1O95749 300 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 MMP3P08254 477 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 GNA11P29992 359 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 ICAM3P32942 547 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 MAGEA10P43363 369 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-213ENST00000498495 PSMC6P62333 389 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 MDM2Q00987 491 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-213ENST00000498495 SP2Q02086 613 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 FAAP100Q0VG06 881 aa14.66□□□□□ -0.06
HSPG2-213ENST00000498495 CELF3Q5SZQ8 465 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms