RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ARFGEF2Q9Y6D5 1785 aa6.46□□□□□ -1.37
HMGXB4-208ENST00000498325 FAM155AB1AL88 458 aaPredicted RBP6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 CELF2O95319 508 aaKnown RBP6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 SERPINB2P05120 415 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 SLFN14P0C7P3 912 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 LIG1P18858 919 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 G3BP1Q13283 466 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 OS9Q13438 667 aaPredicted RBP6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 MTMR3Q13615 1198 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 ECM1Q16610 540 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 BMP2KLQ5H9B9 411 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 TTLL10Q6ZVT0 673 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 KIF1BPQ96EK5 621 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 SUCLG2Q96I99 432 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 HHIPL1Q96JK4 782 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 ISCA1Q9BUE6 129 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 DUSP23Q9BVJ7 150 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 ZNF576Q9H609 170 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 SAGE1Q9NXZ1 904 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 EXOC6BQ9Y2D4 811 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 NOP58Q9Y2X3 529 aaKnown RBP6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 SNX11Q9Y5W9 270 aa6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 DICER1Q9UPY3 1922 aaKnown RBP6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 AFDNP55196 1824 aaKnown RBP6.46□□□□□ -1.38
HMGXB4-208ENST00000498325 COL15A1P39059 1388 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 FER1L6Q2WGJ9 1857 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 RNGTTO60942 597 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 ANP32AP39687 249 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 EPS15P42566 896 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 CRKLP46109 303 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 EIF5P55010 431 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 KIF23Q02241 960 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 ID3Q02535 119 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 ZP2Q05996 745 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 NOGQ13253 232 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 IKZF1Q13422 519 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 MPZL3Q6UWV2 235 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 UBE3BQ7Z3V4 1068 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 GALNT12Q8IXK2 581 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 WDR89Q96FK6 387 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 BICC1Q9H694 974 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 ZNF277Q9NRM2 450 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 RAPGEFL1Q9UHV5 662 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 CTNND2Q9UQB3 1225 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 ZBTB1Q9Y2K1 713 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 ZNF831Q5JPB2 1677 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 TJP1Q07157 1748 aa6.45□□□□□ -1.38
HMGXB4-208ENST00000498325 FZD9O00144 591 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 SMARCA5O60264 1052 aaPredicted RBP6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 PCCAP05165 728 aaPredicted RBP6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 HSP90B1P14625 803 aaKnown RBP6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 NPR3P17342 541 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 AFMP43652 599 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 CASP7P55210 303 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 PRR23BQ6ZRT6 265 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 CLASRPQ8N2M8 674 aaKnown RBP6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 ASB11Q8WXH4 323 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 KAZALD1Q96I82 304 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 GLIS2Q9BZE0 524 aaPredicted RBP6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 TNKS2Q9H2K2 1166 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 CCDC86Q9H6F5 360 aaKnown RBP6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 DISC1Q9NRI5 854 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 PCOLCE2Q9UKZ9 415 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 ZNF652Q9Y2D9 606 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 COL5A3P25940 1745 aaPredicted RBP6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 NRXN2Q9P2S2 1712 aa6.44□□□□□ -1.38
HMGXB4-208ENST00000498325 H0YGN5 161 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 NFIBO00712 420 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 FAM13AO94988 1023 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 C1QTNF9P0C862 333 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 HCLS1P14317 486 aaPredicted RBP6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 MX1P20591 662 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 PDE1AP54750 535 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 TTLL4Q14679 1199 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 PKN2Q16513 984 aaKnown RBP6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 RABL6Q3YEC7 729 aaPredicted RBP6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 PARP10Q53GL7 1025 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 TTC22Q5TAA0 569 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 FYB2Q5VWT5 728 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 CASC1Q6TDU7 716 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 LMBR1LQ6UX01 489 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 OLFM4Q6UX06 510 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 DLK2Q6UY11 383 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 GJD3Q8N144 294 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 GPC2Q8N158 579 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 TOP6BLQ8N6T0 577 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 ZBTB38Q8NAP3 1195 aaPredicted RBP6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 GPATCH3Q96I76 525 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 ZC3H12CQ9C0D7 883 aaKnown RBP6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 ZNF408Q9H9D4 720 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 COPRSQ9NQ92 184 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 STAP2Q9UGK3 403 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 AOX1Q06278 1338 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 CDHR2Q9BYE9 1310 aa6.43□□□□□ -1.38
HMGXB4-208ENST00000498325 ERC2O15083 957 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 FZD6O60353 706 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 CDC45O75419 566 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 GLI1P08151 1106 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms