RNA–Protein interactions for RNA: ENST00000498268.1

USP34-222, Transcript of ubiquitin specific peptidase 34, human

TSL 3

Gene USP34, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP34-222	ENST00000498268	SMARCA5	O60264	1052 aa	Predicted RBP	6.22	□□□□□ -1.41
USP34-222	ENST00000498268	RPL13	P26373	211 aa	Known RBP	6.22	□□□□□ -1.41
USP34-222	ENST00000498268	MAGEA10	P43363	369 aa	Predicted RBP	6.22	□□□□□ -1.41
USP34-222	ENST00000498268	PRSS53	Q2L4Q9	553 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	RGL3	Q3MIN7	710 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	6.22	□□□□□ -1.41
USP34-222	ENST00000498268	PRR31	Q5SQ13	230 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	MCTP2	Q6DN12	878 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	DENND5A	Q6IQ26	1287 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	POMZP3	Q6PJE2	187 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	CEP68	Q76N32	757 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	MILR1	Q7Z6M3	343 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	DCP2	Q8IU60	420 aa	Known RBP	6.22	□□□□□ -1.41
USP34-222	ENST00000498268	KY	Q8NBH2	561 aa		6.22	□□□□□ -1.41
USP34-222	ENST00000498268	DDX3X	O00571	662 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
USP34-222	ENST00000498268	SMAD7	O15105	426 aa	Known RBP	6.21	□□□□□ -1.42
USP34-222	ENST00000498268	ITGAV	P06756	1048 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	LCP1	P13796	627 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	ITGA1	P56199	1179 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	ADAM17	P78536	824 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	CR1L	Q2VPA4	569 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	C6orf15	Q6UXA7	325 aa	Predicted RBP	6.21	□□□□□ -1.42
USP34-222	ENST00000498268	MICAL1	Q8TDZ2	1067 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	KRTAP3-1	Q9BYR8	98 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	TGIF2	Q9GZN2	237 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	TMPRSS5	Q9H3S3	457 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	CNOT11	Q9UKZ1	510 aa	Known RBP	6.21	□□□□□ -1.42
USP34-222	ENST00000498268	INVS	Q9Y283	1065 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	INPP5F	Q9Y2H2	1132 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	TIMM13	Q9Y5L4	95 aa	Predicted RBP	6.21	□□□□□ -1.42
USP34-222	ENST00000498268		X6R8D5	127 aa		6.21	□□□□□ -1.42
USP34-222	ENST00000498268	ATF4	P18848	351 aa	Predicted RBP	6.2	□□□□□ -1.42
USP34-222	ENST00000498268	ECI1	P42126	302 aa		6.2	□□□□□ -1.42
USP34-222	ENST00000498268	ZNF143	P52747	638 aa	Predicted RBP	6.2	□□□□□ -1.42
USP34-222	ENST00000498268	NCAPH	Q15003	741 aa		6.2	□□□□□ -1.42
USP34-222	ENST00000498268	RCBTB1	Q8NDN9	531 aa		6.2	□□□□□ -1.42
USP34-222	ENST00000498268	SEC14L1	Q92503	715 aa		6.2	□□□□□ -1.42
USP34-222	ENST00000498268	GPR20	Q99678	358 aa		6.2	□□□□□ -1.42
USP34-222	ENST00000498268	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.2	□□□□□ -1.42
USP34-222	ENST00000498268	AP5M1	Q9H0R1	490 aa		6.2	□□□□□ -1.42
USP34-222	ENST00000498268	WASF3	Q9UPY6	502 aa		6.2	□□□□□ -1.42
USP34-222	ENST00000498268	RPL11	P62913	178 aa	Known RBP	6.19	□□□□□ -1.42
USP34-222	ENST00000498268	ADAM9	Q13443	819 aa		6.19	□□□□□ -1.42
USP34-222	ENST00000498268	ZNF827	Q17R98	1081 aa		6.19	□□□□□ -1.42
USP34-222	ENST00000498268	ZNF227	Q86WZ6	799 aa		6.19	□□□□□ -1.42
USP34-222	ENST00000498268		Q8N1Y9	231 aa		6.19	□□□□□ -1.42
USP34-222	ENST00000498268	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.19	□□□□□ -1.42
USP34-222	ENST00000498268	TXNDC5	Q8NBS9	432 aa	Known RBP	6.19	□□□□□ -1.42
USP34-222	ENST00000498268	DIO2	Q92813	273 aa		6.19	□□□□□ -1.42
USP34-222	ENST00000498268	TRMT2B	Q96GJ1	504 aa	Known RBP	6.19	□□□□□ -1.42
USP34-222	ENST00000498268	SMPD4	Q9NXE4	827 aa		6.19	□□□□□ -1.42
USP34-222	ENST00000498268	HOXC12	P31275	282 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	SLC6A11	P48066	632 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	SV2C	Q496J9	727 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	MRM1	Q6IN84	353 aa	Known RBP	6.18	□□□□□ -1.42
USP34-222	ENST00000498268	LIMS2	Q7Z4I7	341 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	RIOX2	Q8IUF8	465 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	FAM178B	Q8IXR5	827 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	FAM126B	Q8IXS8	530 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	ARRDC4	Q8NCT1	418 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	MYRF	Q9Y2G1	1151 aa		6.18	□□□□□ -1.42
USP34-222	ENST00000498268	MROH6	A6NGR9	719 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	PLAT	P00750	562 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	CAPNS1	P04632	268 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	SCG5	P05408	212 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	SNRPB2	P08579	225 aa	Known RBP	6.17	□□□□□ -1.42
USP34-222	ENST00000498268	ETFB	P38117	255 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	MROH9	Q5TGP6	573 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	LARP1B	Q659C4	914 aa	Known RBP	6.17	□□□□□ -1.42
USP34-222	ENST00000498268	E4F1	Q66K89	784 aa	Predicted RBP	6.17	□□□□□ -1.42
USP34-222	ENST00000498268	IQCE	Q6IPM2	695 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	TTLL6	Q8N841	843 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	C8orf49	Q96NF6	230 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	STRIP2	Q9ULQ0	834 aa		6.17	□□□□□ -1.42
USP34-222	ENST00000498268	MEFV	O15553	781 aa	Predicted RBP	6.16	□□□□□ -1.42
USP34-222	ENST00000498268	NAT2	P11245	290 aa		6.16	□□□□□ -1.42
USP34-222	ENST00000498268	GRIA2	P42262	883 aa		6.16	□□□□□ -1.42
USP34-222	ENST00000498268	BORCS6	Q96GS4	357 aa		6.16	□□□□□ -1.42
USP34-222	ENST00000498268	TMEM169	Q96HH4	297 aa		6.16	□□□□□ -1.42
USP34-222	ENST00000498268	LOXL4	Q96JB6	756 aa		6.16	□□□□□ -1.42
USP34-222	ENST00000498268	ZSWIM3	Q96MP5	696 aa		6.16	□□□□□ -1.42
USP34-222	ENST00000498268	PCDHA2	Q9Y5H9	948 aa		6.16	□□□□□ -1.42
USP34-222	ENST00000498268	SUSD5	O60279	629 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	B4GALT3	O60512	393 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	TADA3	O75528	432 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	MLLT6	P55198	1093 aa	Predicted RBP	6.15	□□□□□ -1.42
USP34-222	ENST00000498268	KIAA2012	Q0VF49	1180 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	FAM26F	Q5R3K3	315 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	ZC3H18	Q86VM9	953 aa	Known RBP	6.15	□□□□□ -1.42
USP34-222	ENST00000498268	TMEM145	Q8NBT3	493 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	C1orf159	Q96HA4	380 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	KRTAP17-1	Q9BYP8	105 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	CDIP1	Q9H305	208 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	CCSER2	Q9H7U1	834 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	PCDH18	Q9HCL0	1135 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	ACTR10	Q9NZ32	417 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	LRP2BP	Q9P2M1	347 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	RBPJL	Q9UBG7	517 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	ST6GALNAC2	Q9UJ37	374 aa		6.15	□□□□□ -1.42
USP34-222	ENST00000498268	TCRBV5S2	A0A599	114 aa		6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms