RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ZCCHC4Q9H5U6 513 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 GPR27Q9NS67 375 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 SIRT5Q9NXA8 310 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 FBLN5Q9UBX5 448 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 DBR1Q9UK59 544 aaKnown RBP4.35□□□□□ -1.71
RIF1-212ENST00000498041 NUDT5Q9UKK9 219 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 PCDHA2Q9Y5H9 948 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 ZC3H12DA2A288 527 aaKnown RBP4.34□□□□□ -1.71
RIF1-212ENST00000498041 C22orf46C9J442 243 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 F8W031 263 aaPredicted RBP4.34□□□□□ -1.71
RIF1-212ENST00000498041 H7BY64 318 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 NTRK1P04629 796 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 GLDCP23378 1020 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 SUMO1P63165 101 aaKnown RBP4.34□□□□□ -1.71
RIF1-212ENST00000498041 NTRK3Q16288 839 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 PLEKHN1Q494U1 663 aaPredicted RBP4.34□□□□□ -1.71
RIF1-212ENST00000498041 FAM209AQ5JX71 171 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 MROH9Q5TGP6 573 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 FOXB2Q5VYV0 432 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 WWC2Q6AWC2 1192 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 TMC6Q7Z403 805 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 Q8N1Y9 231 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 JMYQ8N9B5 988 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 ZSWIM2Q8NEG5 633 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 PEX11GQ96HA9 241 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 TMEM169Q96HH4 297 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 ZFYVE21Q9BQ24 234 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 DHRS4Q9BTZ2 278 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 PHF20Q9BVI0 1012 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 USP35Q9P2H5 1018 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 X6R8D5 127 aa4.34□□□□□ -1.71
RIF1-212ENST00000498041 CCDC163A0A0D9SF12 145 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 BLACEA4D250 179 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 ZBTB7AO95365 584 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 MED14OSP0DP75 135 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 FPR2P25090 351 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 LINC00310P59036 64 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 GPR85P60893 370 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 DLG4P78352 724 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 PRR5P85299 388 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 C2orf27AQ580R0 203 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 STYK1Q6J9G0 422 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 KCNT2Q6UVM3 1135 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 NLRP10Q86W26 655 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 DCP2Q8IU60 420 aaKnown RBP4.33□□□□□ -1.72
RIF1-212ENST00000498041 RIOX2Q8IUF8 465 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 IFNL3Q8IZI9 196 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 LILRB2Q8N423 598 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 RELTQ969Z4 430 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 EXOC2Q96KP1 924 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 C20orf173Q96LM9 149 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 CNTD2Q9H8S5 307 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 CD320Q9NPF0 282 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 CLDND1Q9NY35 253 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 MBD1Q9UIS9 605 aaPredicted RBP4.33□□□□□ -1.72
RIF1-212ENST00000498041 FBXL7Q9UJT9 491 aa4.33□□□□□ -1.72
RIF1-212ENST00000498041 COA3Q9Y2R0 106 aaPredicted RBP4.33□□□□□ -1.72
RIF1-212ENST00000498041 MRPS23Q9Y3D9 190 aaKnown RBP4.33□□□□□ -1.72
RIF1-212ENST00000498041 MSCO60682 206 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 SLC6A11P48066 632 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 SLC9A5Q14940 896 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 KIZQ2M2Z5 673 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 LBX2Q6XYB7 198 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 MAMDC2Q7Z304 686 aaPredicted RBP4.32□□□□□ -1.72
RIF1-212ENST00000498041 LDHDQ86WU2 507 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.32□□□□□ -1.72
RIF1-212ENST00000498041 SEC14L1Q92503 715 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 PTPRN2Q92932 1015 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 KISS1RQ969F8 398 aaPredicted RBP4.32□□□□□ -1.72
RIF1-212ENST00000498041 TSPAN17Q96FV3 270 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 SGPP1Q9BX95 441 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 AP5M1Q9H0R1 490 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 PIF1Q9H611 641 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 RXFP1Q9HBX9 757 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 GCM1Q9NP62 436 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 HCFC2Q9Y5Z7 792 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 PTCH2Q9Y6C5 1203 aa4.32□□□□□ -1.72
RIF1-212ENST00000498041 IRS2Q9Y4H2 1338 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 AQP7O14520 342 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 N4BP3O15049 544 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 C6orf222P0C671 652 aaPredicted RBP4.31□□□□□ -1.72
RIF1-212ENST00000498041 CDR1P51861 262 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 GABREP78334 506 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 ZNF200P98182 395 aaPredicted RBP4.31□□□□□ -1.72
RIF1-212ENST00000498041 TARBP2Q15633 366 aaKnown RBP4.31□□□□□ -1.72
RIF1-212ENST00000498041 CHRNA2Q15822 529 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 AMIGO3Q86WK7 504 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 MZB1Q8WU39 189 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 CDIP1Q9H305 208 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 EPB41L1Q9H4G0 881 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 SIT1Q9Y3P8 196 aa4.31□□□□□ -1.72
RIF1-212ENST00000498041 ASXL2Q76L83 1435 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 SGSM2O43147 1006 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 DGKIO75912 1065 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 NCAM1P13591 858 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 PFKLP17858 780 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 NAT1P18440 290 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 EPHB3P54753 998 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 SH3TC2Q8TF17 1288 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms