RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RGL3Q3MIN7 710 aa6.74□□□□□ -1.33
SMC4-227ENST00000497984 TBC1D10BQ4KMP7 808 aaPredicted RBP6.74□□□□□ -1.33
SMC4-227ENST00000497984 C9orf131Q5VYM1 1079 aa6.74□□□□□ -1.33
SMC4-227ENST00000497984 Q8N1Y9 231 aa6.74□□□□□ -1.33
SMC4-227ENST00000497984 CPLX3Q8WVH0 158 aa6.74□□□□□ -1.33
SMC4-227ENST00000497984 SEC14L1Q92503 715 aa6.74□□□□□ -1.33
SMC4-227ENST00000497984 PLATP00750 562 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 FPR2P25090 351 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 ITGA1P56199 1179 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 FAM26FQ5R3K3 315 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 CD300LDQ6UXZ3 194 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 STK32CQ86UX6 486 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 NLRP10Q86W26 655 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 RIOX2Q8IUF8 465 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 CCDC103Q8IW40 242 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 FAM126BQ8IXS8 530 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 SSBP3Q9BWW4 388 aaPredicted RBP6.73□□□□□ -1.33
SMC4-227ENST00000497984 BTG4Q9NY30 223 aa6.73□□□□□ -1.33
SMC4-227ENST00000497984 NOP56O00567 594 aaKnown RBP6.72□□□□□ -1.33
SMC4-227ENST00000497984 NAT2P11245 290 aa6.72□□□□□ -1.33
SMC4-227ENST00000497984 TNFRSF1AP19438 455 aa6.72□□□□□ -1.33
SMC4-227ENST00000497984 NCAPHQ15003 741 aa6.72□□□□□ -1.33
SMC4-227ENST00000497984 C1QTNF3Q9BXJ4 246 aa6.72□□□□□ -1.33
SMC4-227ENST00000497984 TMEFF2Q9UIK5 374 aaPredicted RBP6.72□□□□□ -1.33
SMC4-227ENST00000497984 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
SMC4-227ENST00000497984 MROH6A6NGR9 719 aa6.71□□□□□ -1.34
SMC4-227ENST00000497984 MROH9Q5TGP6 573 aa6.71□□□□□ -1.34
SMC4-227ENST00000497984 LGI4Q8N135 537 aa6.71□□□□□ -1.34
SMC4-227ENST00000497984 TTC9BQ8N6N2 239 aa6.71□□□□□ -1.34
SMC4-227ENST00000497984 TTLL6Q8N841 843 aa6.71□□□□□ -1.34
SMC4-227ENST00000497984 SAMD11Q96NU1 681 aa6.71□□□□□ -1.34
SMC4-227ENST00000497984 INVSQ9Y283 1065 aa6.71□□□□□ -1.34
SMC4-227ENST00000497984 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
SMC4-227ENST00000497984 X6R8D5 127 aa6.71□□□□□ -1.34
SMC4-227ENST00000497984 TBX1O43435 398 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 STAT5AP42229 794 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 RPL11P62913 178 aaKnown RBP6.7□□□□□ -1.34
SMC4-227ENST00000497984 KIAA2012Q0VF49 1180 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 ADAM9Q13443 819 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 CR1LQ2VPA4 569 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 E4F1Q66K89 784 aaPredicted RBP6.7□□□□□ -1.34
SMC4-227ENST00000497984 MCTP2Q6DN12 878 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 IQCEQ6IPM2 695 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 MILR1Q7Z6M3 343 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 ZC3H18Q86VM9 953 aaKnown RBP6.7□□□□□ -1.34
SMC4-227ENST00000497984 TXNDC5Q8NBS9 432 aaKnown RBP6.7□□□□□ -1.34
SMC4-227ENST00000497984 KREMEN2Q8NCW0 462 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 BTN2A2Q8WVV5 523 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 ACBD3Q9H3P7 528 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 FBXL7Q9UJT9 491 aa6.7□□□□□ -1.34
SMC4-227ENST00000497984 ZBTB7CA1YPR0 619 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 C1QTNF3-AMACRE9PGA6 284 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 DDX3XO00571 662 aaKnown RBP eCLIP6.69□□□□□ -1.344e-78■■■■■ 527.9
SMC4-227ENST00000497984 MATN3O15232 486 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 ZNF20P17024 532 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 BCL6P41182 706 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 CPZQ66K79 652 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 CEP68Q76N32 757 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 PPP1R14AQ96A00 147 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 C8orf49Q96NF6 230 aa6.69□□□□□ -1.34
SMC4-227ENST00000497984 SCG5P05408 212 aa6.68□□□□□ -1.34
SMC4-227ENST00000497984 ZNF28P17035 718 aa6.68□□□□□ -1.34
SMC4-227ENST00000497984 TESK1Q15569 626 aa6.68□□□□□ -1.34
SMC4-227ENST00000497984 ZNF227Q86WZ6 799 aa6.68□□□□□ -1.34
SMC4-227ENST00000497984 DIO2Q92813 273 aa6.68□□□□□ -1.34
SMC4-227ENST00000497984 MRRFQ96E11 262 aaKnown RBP6.68□□□□□ -1.34
SMC4-227ENST00000497984 LOXL4Q96JB6 756 aa6.68□□□□□ -1.34
SMC4-227ENST00000497984 TGIF2Q9GZN2 237 aa6.68□□□□□ -1.34
SMC4-227ENST00000497984 KIAA1522Q9P206 1035 aaPredicted RBP6.68□□□□□ -1.34
SMC4-227ENST00000497984 ZNF652Q9Y2D9 606 aa6.68□□□□□ -1.34
SMC4-227ENST00000497984 ITGAVP06756 1048 aa6.67□□□□□ -1.34
SMC4-227ENST00000497984 HOXC12P31275 282 aa6.67□□□□□ -1.34
SMC4-227ENST00000497984 GTF2A2P52657 109 aa6.67□□□□□ -1.34
SMC4-227ENST00000497984 KCNAB2Q13303 367 aa6.67□□□□□ -1.34
SMC4-227ENST00000497984 C6orf15Q6UXA7 325 aaPredicted RBP6.67□□□□□ -1.34
SMC4-227ENST00000497984 RCBTB1Q8NDN9 531 aa6.67□□□□□ -1.34
SMC4-227ENST00000497984 TRMT2BQ96GJ1 504 aaKnown RBP6.67□□□□□ -1.34
SMC4-227ENST00000497984 NGRNQ9NPE2 291 aaKnown RBP6.67□□□□□ -1.34
SMC4-227ENST00000497984 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
SMC4-227ENST00000497984 MEFVO15553 781 aaPredicted RBP6.66□□□□□ -1.34
SMC4-227ENST00000497984 B4GALT3O60512 393 aa6.66□□□□□ -1.34
SMC4-227ENST00000497984 ATF4P18848 351 aaPredicted RBP6.66□□□□□ -1.34
SMC4-227ENST00000497984 SF1Q15637 639 aaKnown RBP6.66□□□□□ -1.34
SMC4-227ENST00000497984 PRSS53Q2L4Q9 553 aa6.66□□□□□ -1.34
SMC4-227ENST00000497984 ACBD5Q5T8D3 534 aaPredicted RBP6.66□□□□□ -1.34
SMC4-227ENST00000497984 BORAQ6PGQ7 559 aa6.66□□□□□ -1.34
SMC4-227ENST00000497984 FAM124AQ86V42 546 aa6.66□□□□□ -1.34
SMC4-227ENST00000497984 TMEM169Q96HH4 297 aa6.66□□□□□ -1.34
SMC4-227ENST00000497984 LCORQ96JN0 433 aaPredicted RBP6.66□□□□□ -1.34
SMC4-227ENST00000497984 INPP5FQ9Y2H2 1132 aa6.66□□□□□ -1.34
SMC4-227ENST00000497984 B2RBV5 119 aa6.65□□□□□ -1.34
SMC4-227ENST00000497984 SMAD7O15105 426 aaKnown RBP6.65□□□□□ -1.34
SMC4-227ENST00000497984 AKAP8O43823 692 aaKnown RBP6.65□□□□□ -1.34
SMC4-227ENST00000497984 TADA3O75528 432 aa6.65□□□□□ -1.34
SMC4-227ENST00000497984 SNRPB2P08579 225 aaKnown RBP6.65□□□□□ -1.34
SMC4-227ENST00000497984 ECI1P42126 302 aa6.65□□□□□ -1.34
SMC4-227ENST00000497984 NKX3-2P78367 333 aa6.65□□□□□ -1.34
SMC4-227ENST00000497984 ZXDAP98168 799 aa6.65□□□□□ -1.34
SMC4-227ENST00000497984 DENND5AQ6IQ26 1287 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms