RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 IWS1Q96ST2 819 aa25.46■■□□□ 1.67
CLIC4-204ENST00000497755 KIAA1217Q5T5P2 1943 aa25.45■■□□□ 1.67
CLIC4-204ENST00000497755 LCHNA4D1U4 455 aa25.45■■□□□ 1.66
CLIC4-204ENST00000497755 SELPP16109 830 aa25.45■■□□□ 1.66
CLIC4-204ENST00000497755 CASTP20810 708 aaKnown RBP25.45■■□□□ 1.66
CLIC4-204ENST00000497755 KCNJ6P48051 423 aa25.45■■□□□ 1.66
CLIC4-204ENST00000497755 WDR5P61964 334 aaKnown RBP25.45■■□□□ 1.66
CLIC4-204ENST00000497755 STXBP2Q15833 593 aa25.45■■□□□ 1.66
CLIC4-204ENST00000497755 PNMA1Q8ND90 353 aa25.45■■□□□ 1.66
CLIC4-204ENST00000497755 CRBNQ96SW2 442 aa25.45■■□□□ 1.66
CLIC4-204ENST00000497755 RMDN3Q96TC7 470 aa25.45■■□□□ 1.66
CLIC4-204ENST00000497755 DDX41Q9UJV9 622 aaKnown RBP25.45■■□□□ 1.66
CLIC4-204ENST00000497755 ZNF213O14771 459 aa25.44■■□□□ 1.66
CLIC4-204ENST00000497755 RBL2Q08999 1139 aa25.44■■□□□ 1.66
CLIC4-204ENST00000497755 LRRC8DQ7L1W4 858 aa25.44■■□□□ 1.66
CLIC4-204ENST00000497755 RILPL2Q969X0 211 aa25.44■■□□□ 1.66
CLIC4-204ENST00000497755 C1QTNF1Q9BXJ1 281 aa25.44■■□□□ 1.66
CLIC4-204ENST00000497755 CXCL10P02778 98 aa25.43■■□□□ 1.66
CLIC4-204ENST00000497755 SDSP20132 328 aa25.43■■□□□ 1.66
CLIC4-204ENST00000497755 RRP1P56182 461 aaKnown RBP25.43■■□□□ 1.66
CLIC4-204ENST00000497755 DGKDQ16760 1214 aa25.43■■□□□ 1.66
CLIC4-204ENST00000497755 TCTN1Q2MV58 587 aa25.43■■□□□ 1.66
CLIC4-204ENST00000497755 MCF2L2Q86YR7 1114 aa25.43■■□□□ 1.66
CLIC4-204ENST00000497755 HLA-CQ95604 372 aa25.43■■□□□ 1.66
CLIC4-204ENST00000497755 HDAC6Q9UBN7 1215 aa25.43■■□□□ 1.66
CLIC4-204ENST00000497755 GTF2IRD1Q9UHL9 959 aa25.43■■□□□ 1.66
CLIC4-204ENST00000497755 NBNO60934 754 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 KDM4AO75164 1064 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 CKBP12277 381 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 DEFB103AP81534 67 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 QRICH1Q2TAL8 776 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 CCDC178Q5BJE1 867 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 CNKSR3Q6P9H4 555 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 IQCA1Q86XH1 822 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 LNPKQ9C0E8 428 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 KAT14Q9H8E8 782 aa25.42■■□□□ 1.66
CLIC4-204ENST00000497755 MYH7BA7E2Y1 1941 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 RBAK-RBAKDNI3L0D1 243 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 EIF3JO75822 258 aaKnown RBP25.41■■□□□ 1.66
CLIC4-204ENST00000497755 PARNO95453 639 aaKnown RBP25.41■■□□□ 1.66
CLIC4-204ENST00000497755 NT5C2P49902 561 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 MFAP1P55081 439 aaKnown RBP25.41■■□□□ 1.66
CLIC4-204ENST00000497755 ARHGEF16Q5VV41 709 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 C7orf31Q8N865 590 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 EMID1Q96A84 441 aaPredicted RBP25.41■■□□□ 1.66
CLIC4-204ENST00000497755 ZBED2Q9BTP6 218 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 EPHX3Q9H6B9 360 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 JMJD4Q9H9V9 463 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 VAT1LQ9HCJ6 419 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 MRPL11Q9Y3B7 192 aaKnown RBP25.41■■□□□ 1.66
CLIC4-204ENST00000497755 MYH6P13533 1939 aa25.41■■□□□ 1.66
CLIC4-204ENST00000497755 EIF2AK2P19525 551 aaKnown RBP25.4■■□□□ 1.66
CLIC4-204ENST00000497755 PSEN2P49810 448 aa25.4■■□□□ 1.66
CLIC4-204ENST00000497755 ASPRV1Q53RT3 343 aa25.4■■□□□ 1.66
CLIC4-204ENST00000497755 FBXO11Q86XK2 927 aa25.4■■□□□ 1.66
CLIC4-204ENST00000497755 ZSCAN10Q96SZ4 725 aaPredicted RBP25.4■■□□□ 1.66
CLIC4-204ENST00000497755 ALG1Q9BT22 464 aa25.4■■□□□ 1.66
CLIC4-204ENST00000497755 ZSWIM5Q9P217 1185 aa25.4■■□□□ 1.66
CLIC4-204ENST00000497755 ABHD14A-ACY1A0A1B0GW23 586 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 B4E1Z4 1266 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 HAS3O00219 553 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 NR3C2P08235 984 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 LAMC2Q13753 1193 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 TRAF7Q6Q0C0 670 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 ENAHQ8N8S7 591 aaPredicted RBP25.39■■□□□ 1.66
CLIC4-204ENST00000497755 RAD9AQ99638 391 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 PXMP2Q9NR77 195 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 LMCD1Q9NZU5 365 aa25.39■■□□□ 1.66
CLIC4-204ENST00000497755 GJB5O95377 273 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 PLA2G5P39877 138 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 PTK7Q13308 1070 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 MFSD10Q14728 455 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 TRIM71Q2Q1W2 868 aaKnown RBP25.38■■□□□ 1.65
CLIC4-204ENST00000497755 PPTC7Q8NI37 304 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 GDPD5Q8WTR4 605 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 WNT8BQ93098 351 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 SUGCTQ9HAC7 445 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 MRVI1Q9Y6F6 885 aa25.38■■□□□ 1.65
CLIC4-204ENST00000497755 OPLAHO14841 1288 aa25.37■■□□□ 1.65
CLIC4-204ENST00000497755 DHX16O60231 1041 aaKnown RBP25.37■■□□□ 1.65
CLIC4-204ENST00000497755 F2P00734 622 aa25.37■■□□□ 1.65
CLIC4-204ENST00000497755 CFBP00751 764 aa25.37■■□□□ 1.65
CLIC4-204ENST00000497755 PARP1P09874 1014 aaKnown RBP25.37■■□□□ 1.65
CLIC4-204ENST00000497755 ZNF200P98182 395 aaPredicted RBP25.37■■□□□ 1.65
CLIC4-204ENST00000497755 MBTPS1Q14703 1052 aa25.37■■□□□ 1.65
CLIC4-204ENST00000497755 KIAA0753Q2KHM9 967 aa25.37■■□□□ 1.65
CLIC4-204ENST00000497755 CWC27Q6UX04 472 aaKnown RBP25.37■■□□□ 1.65
CLIC4-204ENST00000497755 DHX37Q8IY37 1157 aaKnown RBP25.37■■□□□ 1.65
CLIC4-204ENST00000497755 KATNAL1Q9BW62 490 aa25.37■■□□□ 1.65
CLIC4-204ENST00000497755 RGS20O76081 388 aa25.36■■□□□ 1.65
CLIC4-204ENST00000497755 ZNF286BP0CG31 522 aa25.36■■□□□ 1.65
CLIC4-204ENST00000497755 HSD17B4P51659 736 aa25.36■■□□□ 1.65
CLIC4-204ENST00000497755 ERVK-21P61565 698 aa25.36■■□□□ 1.65
CLIC4-204ENST00000497755 IKBKEQ14164 716 aa25.36■■□□□ 1.65
CLIC4-204ENST00000497755 HIC1Q14526 733 aa25.36■■□□□ 1.65
CLIC4-204ENST00000497755 ZNF618Q5T7W0 954 aa25.36■■□□□ 1.65
CLIC4-204ENST00000497755 FAM122AQ96E09 287 aa25.36■■□□□ 1.65
CLIC4-204ENST00000497755 COL4A4P53420 1690 aaPredicted RBP25.36■■□□□ 1.65
CLIC4-204ENST00000497755 LINC01553A4QN01 128 aa25.35■■□□□ 1.65
CLIC4-204ENST00000497755 PPFIA4O75335 1185 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms