RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 BMP8BP34820 402 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 MAGEA10P43363 369 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 SH3RF1Q7Z6J0 888 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 SLC43A3Q8NBI5 491 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 TRIM43Q96BQ3 446 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 IL17RAQ96F46 866 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 TOX2Q96NM4 488 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 PSTPIP2Q9H939 334 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 PDLIM7Q9NR12 457 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 DDX41Q9UJV9 622 aaKnown RBP18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 GRIN2DO15399 1336 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 NID2Q14112 1375 aa18.39■□□□□ 0.53
CTDSP1-214ENST00000497677 A6NJR5 290 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 ARVCFO00192 962 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 ZEB2O60315 1214 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 CABYRO75952 493 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 MYCLP12524 364 aaPredicted RBP18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 PDIA3P30101 505 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 RABEP1Q15276 862 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 LY6KQ17RY6 165 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 WWC2Q6AWC2 1192 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 OR6J1Q8NGC5 347 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 GPKOWQ92917 476 aaPredicted RBP eCLIP18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 ZFP91Q96JP5 570 aaPredicted RBP18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 UPF3BQ9BZI7 483 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 CYP46A1Q9Y6A2 500 aa18.38■□□□□ 0.53
CTDSP1-214ENST00000497677 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 PQBP1O60828 265 aaKnown RBP18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 ARHGAP1Q07960 439 aa18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 FAAP100Q0VG06 881 aa18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 NTRK3Q16288 839 aa18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 HEATR3Q7Z4Q2 680 aa18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 SNX21Q969T3 373 aa18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 VTI1AQ96AJ9 217 aa18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-214ENST00000497677 ITGB8P26012 769 aa18.36■□□□□ 0.53
CTDSP1-214ENST00000497677 CCND2P30279 289 aa18.36■□□□□ 0.53
CTDSP1-214ENST00000497677 CPT1AP50416 773 aa18.36■□□□□ 0.53
CTDSP1-214ENST00000497677 PURAQ00577 322 aaKnown RBP18.36■□□□□ 0.53
CTDSP1-214ENST00000497677 SMARCC2Q8TAQ2 1214 aa18.36■□□□□ 0.53
CTDSP1-214ENST00000497677 CUL5Q93034 780 aa18.36■□□□□ 0.53
CTDSP1-214ENST00000497677 STXBP3O00186 592 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 KIAA0355O15063 1070 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 GH1P01241 217 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 CLTBP09497 229 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 PSMC6P62333 389 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 MDM2Q00987 491 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 SP2Q02086 613 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 ITGA7Q13683 1181 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 PKN1Q16512 942 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 AFG1LQ8WV93 481 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 EMID1Q96A84 441 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 INPP4AQ96PE3 977 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 BARHL2Q9NY43 387 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 MRVI1Q9Y6F6 885 aa18.35■□□□□ 0.53
CTDSP1-214ENST00000497677 DCDC2CA8MYV0 355 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 TGFB3P10600 412 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 UBE2SQ16763 222 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 PFKFB3Q16875 520 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 PCNX4Q63HM2 1172 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 KCNV1Q6PIU1 500 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 FAM126BQ8IXS8 530 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 KIF2CQ99661 725 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 RIC8AQ9NPQ8 531 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 PRDM5Q9NQX1 630 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 PDRG1Q9NUG6 133 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 PRKAG2Q9UGJ0 569 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 TBX21Q9UL17 535 aa18.34■□□□□ 0.53
CTDSP1-214ENST00000497677 TRIOBPQ9H2D6 2365 aa18.33■□□□□ 0.53
CTDSP1-214ENST00000497677 A0A1W2PPC1 479 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 hCG_1984214I3L0E3 225 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 KPNA6O60684 536 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 STAM2O75886 525 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 CD4P01730 458 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 MYL3P08590 195 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 IFNAR1P17181 557 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 ICAM3P32942 547 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 SEMA3FQ13275 785 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 PPP1R18Q6NYC8 613 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 XRRA1Q6P2D8 792 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 TEX2Q8IWB9 1127 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 HSCBQ8IWL3 235 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 ZNF713Q8N859 430 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 MTG1Q9BT17 334 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 ALDH8A1Q9H2A2 487 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 BCAS3Q9H6U6 928 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 NCOA5Q9HCD5 579 aaKnown RBP18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 TMEM39AQ9NV64 488 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 MYH6P13533 1939 aa18.33■□□□□ 0.52
CTDSP1-214ENST00000497677 MROH7Q68CQ1 1323 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 SPATA31C2B4DYI2 1134 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms