RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 RUSC1Q9BVN2 902 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 MYH16Q9H6N6 1097 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 ZMYND8Q9ULU4 1186 aaPredicted RBP9.6□□□□□ -0.87
VPS45-210ENST00000497638 GABRQQ9UN88 632 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 POLIQ9UNA4 740 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 BMP3P12645 472 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 MAGEA10P43363 369 aaPredicted RBP9.59□□□□□ -0.87
VPS45-210ENST00000497638 FLT3LGP49771 235 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 MTMR3Q13615 1198 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 MOGSQ13724 837 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 RALBP1Q15311 655 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 RNF43Q68DV7 783 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 FAM109BQ6ICB4 259 aaPredicted RBP9.59□□□□□ -0.87
VPS45-210ENST00000497638 FDX2Q6P4F2 183 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 C8orf58Q8NAV2 365 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 TEKT1Q969V4 418 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 OSMRQ99650 979 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 STK31Q9BXU1 1019 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 CHRDQ9H2X0 955 aa9.59□□□□□ -0.87
VPS45-210ENST00000497638 TNPO2O14787 897 aaKnown RBP9.58□□□□□ -0.88
VPS45-210ENST00000497638 MED26O95402 600 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 HIBADHP31937 336 aaKnown RBP9.58□□□□□ -0.88
VPS45-210ENST00000497638 GRIK1P39086 918 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 CACNB3P54284 484 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 UBE4AQ14139 1066 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 WDR43Q15061 677 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPS45-210ENST00000497638 NOL9Q5SY16 702 aaKnown RBP9.58□□□□□ -0.88
VPS45-210ENST00000497638 ZDHHC13Q8IUH4 622 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 CLEC10AQ8IUN9 316 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 FAM20CQ8IXL6 584 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 TMEM102Q8N9M5 508 aaPredicted RBP9.58□□□□□ -0.88
VPS45-210ENST00000497638 DIS3LQ8TF46 1054 aaKnown RBP9.58□□□□□ -0.88
VPS45-210ENST00000497638 TBC1D22AQ8WUA7 517 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 DBNDD2Q9BQY9 259 aa9.58□□□□□ -0.88
VPS45-210ENST00000497638 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPS45-210ENST00000497638 CXCL11O14625 94 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 PHACTR2O75167 634 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 CYP2C8P10632 490 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 C19orf57Q0VDD7 668 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 BEND4Q6ZU67 534 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 LINS1Q8NG48 757 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 ZDHHC15Q96MV8 337 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 FAM83CQ9BQN1 747 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 MRIQ9BWK5 157 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 ZNF112Q9UJU3 913 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 SOX13Q9UN79 622 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 SLC45A1Q9Y2W3 748 aa9.57□□□□□ -0.88
VPS45-210ENST00000497638 MAST3O60307 1309 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 DOCK3Q8IZD9 2030 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 LAMA2P24043 3122 aaKnown RBP9.56□□□□□ -0.88
VPS45-210ENST00000497638 EREGO14944 169 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 GAS2O43903 313 aaKnown RBP9.56□□□□□ -0.88
VPS45-210ENST00000497638 SYN1P17600 705 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 GYG1P46976 350 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 PREPP48147 710 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 TAF7LQ5H9L4 462 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 MCTP1Q6DN14 999 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 LDHAL6AQ6ZMR3 332 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 MIGA2Q7L4E1 593 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 FASTKD5Q7L8L6 764 aaKnown RBP9.56□□□□□ -0.88
VPS45-210ENST00000497638 BSNDQ8WZ55 320 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 COA7Q96BR5 231 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 FAM84BQ96KN1 310 aaPredicted RBP9.56□□□□□ -0.88
VPS45-210ENST00000497638 GUCD1Q96NT3 240 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 CNNM1Q9NRU3 951 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 PRUNE2Q8WUY3 3088 aa9.56□□□□□ -0.88
VPS45-210ENST00000497638 SPTBN5Q9NRC6 3674 aaKnown RBP9.55□□□□□ -0.88
VPS45-210ENST00000497638 COL2A1P02458 1487 aaPredicted RBP9.55□□□□□ -0.88
VPS45-210ENST00000497638 A0A0G2JLL6 359 aaPredicted RBP9.55□□□□□ -0.88
VPS45-210ENST00000497638 PLIN1O60240 522 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 HMGCRP04035 888 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 EDN3P14138 238 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 FOXO4P98177 505 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 EHHADHQ08426 723 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 IKBKEQ14164 716 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 CCDC57Q2TAC2 916 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 HGSNATQ68CP4 663 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 APOBEC3HQ6NTF7 200 aaKnown RBP9.55□□□□□ -0.88
VPS45-210ENST00000497638 PRRT2Q7Z6L0 340 aaPredicted RBP9.55□□□□□ -0.88
VPS45-210ENST00000497638 ASAP3Q8TDY4 903 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 SMCR8Q8TEV9 937 aaPredicted RBP9.55□□□□□ -0.88
VPS45-210ENST00000497638 DNAAF4Q8WXU2 420 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 NXPE3Q969Y0 559 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 C11orf49Q9H6J7 331 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 SUGT1Q9Y2Z0 365 aa9.55□□□□□ -0.88
VPS45-210ENST00000497638 DDX60LQ5H9U9 1706 aaKnown RBP9.55□□□□□ -0.88
VPS45-210ENST00000497638 MYBBP1AQ9BQG0 1328 aaKnown RBP9.55□□□□□ -0.88
VPS45-210ENST00000497638 EYSQ5T1H1 3165 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 KIAA1324LA8MWY0 1029 aaPredicted RBP9.54□□□□□ -0.88
VPS45-210ENST00000497638 TNFRSF21O75509 655 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 FAM13AO94988 1023 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 HHIPL2Q6UWX4 724 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 LMBR1LQ6UX01 489 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 G2E3Q7L622 706 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 VPS37DQ86XT2 251 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 CCDC82Q8N4S0 544 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 TSPYL6Q8N831 410 aa9.54□□□□□ -0.88
VPS45-210ENST00000497638 SNX29Q8TEQ0 813 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms