RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PPM1MQ96MI6 270 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 TBCBQ99426 244 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 UBE2OQ9C0C9 1292 aaKnown RBP7.32□□□□□ -1.24
BRCA1-224ENST00000497488 RSPH9Q9H1X1 276 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-224ENST00000497488 PDLIM7Q9NR12 457 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 HIF3AQ9Y2N7 669 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 PCDHGB6Q9Y5F9 930 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 MROH2BQ7Z745 1585 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 ATAD2BQ9ULI0 1458 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 A0A1B0GVC2 190 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 HIP1RO75146 1068 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 CKMP06732 381 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 CPB1P15086 417 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 MAOBP27338 520 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 ECI1P42126 302 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 GPR3P46089 330 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 RXRGP48443 463 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-224ENST00000497488 IFIT5Q13325 482 aaKnown RBP7.31□□□□□ -1.24
BRCA1-224ENST00000497488 PDE1CQ14123 709 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-224ENST00000497488 PDE3AQ14432 1141 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 ACAP2Q15057 778 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 CLUL1Q15846 466 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 CREB3L3Q68CJ9 461 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 DENND5AQ6IQ26 1287 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 MZT2BQ6NZ67 158 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 TLDC1Q6P9B6 456 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 KRT77Q7Z794 578 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 FAM35AQ86V20 835 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 CMIPQ8IY22 773 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 SDR16C5Q8N3Y7 309 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 NAXEQ8NCW5 288 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 HPS3Q969F9 1004 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 SERINC2Q96SA4 455 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 CELF4Q9BZC1 486 aaKnown RBP7.31□□□□□ -1.24
BRCA1-224ENST00000497488 AGO4Q9HCK5 861 aaKnown RBP7.31□□□□□ -1.24
BRCA1-224ENST00000497488 BAZ1AQ9NRL2 1556 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-224ENST00000497488 H2AFY2Q9P0M6 372 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-224ENST00000497488 LRCH1Q9Y2L9 728 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 SLC45A1Q9Y2W3 748 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 COQ6Q9Y2Z9 468 aa7.31□□□□□ -1.24
BRCA1-224ENST00000497488 LRRFIP2Q9Y608 721 aaKnown RBP7.31□□□□□ -1.24
BRCA1-224ENST00000497488 CAPN5O15484 640 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-224ENST00000497488 CTSBP07858 339 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 CYP4F3Q08477 520 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 TBC1D8BQ0IIM8 1120 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 AUHQ13825 339 aaKnown RBP7.3□□□□□ -1.24
BRCA1-224ENST00000497488 KIAA0753Q2KHM9 967 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 PRR16Q569H4 304 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 ZBTB37Q5TC79 503 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 TTLL5Q6EMB2 1281 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 LILRA6Q6PI73 481 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 TXNDC11Q6PKC3 985 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 C16orf54Q6UWD8 224 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 C1orf122Q6ZSJ8 110 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 GPR155Q7Z3F1 870 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 PTRH1Q86Y79 214 aaKnown RBP7.3□□□□□ -1.24
BRCA1-224ENST00000497488 HID1Q8IV36 788 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 EFHBQ8N7U6 833 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 TRIM63Q969Q1 353 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 ZFYVE21Q9BQ24 234 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 GTPBP4Q9BZE4 634 aaKnown RBP7.3□□□□□ -1.24
BRCA1-224ENST00000497488 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.3□□□□□ -1.24
BRCA1-224ENST00000497488 SMG9Q9H0W8 520 aaKnown RBP7.3□□□□□ -1.24
BRCA1-224ENST00000497488 NUCKS1Q9H1E3 243 aaKnown RBP7.3□□□□□ -1.24
BRCA1-224ENST00000497488 IFT122Q9HBG6 1241 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 ARFGAP3Q9NP61 516 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 OXSMQ9NWU1 459 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.3□□□□□ -1.24
BRCA1-224ENST00000497488 POLHQ9Y253 713 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 PCDHGC5Q9Y5F6 944 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 KAT6BQ8WYB5 2073 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 NCAPD3P42695 1498 aa7.3□□□□□ -1.24
BRCA1-224ENST00000497488 SOS2Q07890 1332 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-224ENST00000497488 PTPDC1A2A3K4 754 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 AXIN1O15169 862 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 TGM5O43548 720 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 TUSC2O75896 110 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 YBX3P16989 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
BRCA1-224ENST00000497488 IL6STP40189 918 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-224ENST00000497488 AFF1P51825 1210 aaKnown RBP7.29□□□□□ -1.24
BRCA1-224ENST00000497488 GPR85P60893 370 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 PPM1JQ5JR12 505 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 RINLQ6ZS11 566 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 OR2C3Q8N628 320 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 MYCT1Q8N699 235 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 GIMAP8Q8ND71 665 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-224ENST00000497488 CYB5D2Q8WUJ1 264 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 LMBR1Q8WVP7 490 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 JADE3Q92613 823 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 ABHD17AQ96GS6 310 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 RIPOR3Q96MK2 946 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 DPH2Q9BQC3 489 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-224ENST00000497488 MYLK2Q9H1R3 596 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 TMEM60Q9H2L4 133 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 RASSF1Q9NS23 344 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 TOPORSQ9NS56 1045 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-224ENST00000497488 RRN3Q9NYV6 651 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 RTEL1Q9NZ71 1219 aa7.29□□□□□ -1.24
BRCA1-224ENST00000497488 SLC4A7Q9Y6M7 1214 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms