RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 EDIL3O43854 480 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 HSPA8P11142 646 aaKnown RBP22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 ICAM3P32942 547 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 GNPTABQ3T906 1256 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 CLEC17AQ6ZS10 378 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 NPLOC4Q8TAT6 608 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 MXRA8Q9BRK3 442 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 ABHD16BQ9H3Z7 469 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 VTA1Q9NP79 307 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 POLR3EQ9NVU0 708 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 CFAP45Q9UL16 551 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 CEP131Q9UPN4 1083 aa22.45■■□□□ 1.18
SCAMP3-209ENST00000497470 EIF2AK2P19525 551 aaKnown RBP22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 TOB1P50616 345 aaPredicted RBP22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 MRPS9P82933 396 aaKnown RBP22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 PDE4DQ08499 809 aa22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 PKN2Q16513 984 aaKnown RBP22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 NLRX1Q86UT6 975 aa22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 FERMT3Q86UX7 667 aa22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 JADE2Q9NQC1 790 aa22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 PLXNA1Q9UIW2 1896 aa22.44■■□□□ 1.18
SCAMP3-209ENST00000497470 RBM47A0AV96 593 aaKnown RBP22.43■■□□□ 1.18
SCAMP3-209ENST00000497470 HSPA1AP0DMV8 641 aaKnown RBP22.43■■□□□ 1.18
SCAMP3-209ENST00000497470 HSPA1BP0DMV9 641 aaKnown RBP22.43■■□□□ 1.18
SCAMP3-209ENST00000497470 PRKCZQ05513 592 aa22.43■■□□□ 1.18
SCAMP3-209ENST00000497470 TTC38Q5R3I4 469 aa22.43■■□□□ 1.18
SCAMP3-209ENST00000497470 ARMCX2Q7L311 632 aa22.43■■□□□ 1.18
SCAMP3-209ENST00000497470 OTOP1Q7RTM1 612 aa22.43■■□□□ 1.18
SCAMP3-209ENST00000497470 MYH7BA7E2Y1 1941 aa22.42■■□□□ 1.18
SCAMP3-209ENST00000497470 IGLV3-22A0A075B6J6 115 aa22.42■■□□□ 1.18
SCAMP3-209ENST00000497470 FOXN1O15353 648 aa22.42■■□□□ 1.18
SCAMP3-209ENST00000497470 NASPP49321 788 aaPredicted RBP22.42■■□□□ 1.18
SCAMP3-209ENST00000497470 SLAIN1Q8ND83 568 aa22.42■■□□□ 1.18
SCAMP3-209ENST00000497470 FAM20AQ96MK3 541 aa22.42■■□□□ 1.18
SCAMP3-209ENST00000497470 SENP7Q9BQF6 1050 aa22.42■■□□□ 1.18
SCAMP3-209ENST00000497470 RTEL1Q9NZ71 1219 aa22.42■■□□□ 1.18
SCAMP3-209ENST00000497470 FIBPO43427 364 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 YEATS4O95619 227 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 ZNF76P36508 570 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 PRPHP41219 470 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 CAP1Q01518 475 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 LETM2Q2VYF4 491 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 MFSD14CQ5VZR4 134 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 ARL6IP4Q66PJ3 421 aaKnown RBP22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 GIMAP8Q8ND71 665 aaPredicted RBP22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 PGBD1Q96JS3 809 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 PURBQ96QR8 312 aaKnown RBP22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 PRDM10Q9NQV6 1147 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 GABRQQ9UN88 632 aa22.41■■□□□ 1.18
SCAMP3-209ENST00000497470 SNAI1O95863 264 aaPredicted RBP22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 ITGB5P18084 799 aa22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 CYP2B6P20813 491 aa22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 IL31RAQ8NI17 732 aa22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 LENG9Q96B70 501 aa22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 KATNBL1Q9H079 304 aa22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 KCNMB3Q9NPA1 279 aa22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 DDX25Q9UHL0 483 aaKnown RBP22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 CNPY2Q9Y2B0 182 aa22.4■■□□□ 1.18
SCAMP3-209ENST00000497470 FAM205CA6NFA0 338 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 SPATA31C2B4DYI2 1134 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 FAM86B1E9PN63 330 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 CCNT1O60563 726 aaKnown RBP22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 FAM86B2P0C5J1 330 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 KRT85P78386 507 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 ANO1Q5XXA6 986 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 IQSEC1Q6DN90 963 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 SLFN12Q8IYM2 578 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 SCFD2Q8WU76 684 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 SCAND2PQ9GZW5 306 aaPredicted RBP22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 TRIM17Q9Y577 477 aa22.39■■□□□ 1.17
SCAMP3-209ENST00000497470 NKRFO15226 690 aaKnown RBP eCLIP22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 NEMFO60524 1076 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 RGS20O76081 388 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 HMGCRP04035 888 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 MYCLP12524 364 aaPredicted RBP22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 ATP2C1P98194 919 aaPredicted RBP22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 SLC39A14Q15043 492 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 CTU1Q7Z7A3 348 aaKnown RBP22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 C4orf32Q8N8J7 132 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 RAET1EQ8TD07 263 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 MTMR9Q96QG7 549 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 RIT2Q99578 217 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 TBC1D22BQ9NU19 505 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 PTPN22Q9Y2R2 807 aa22.38■■□□□ 1.17
SCAMP3-209ENST00000497470 LRRC37A2A6NM11 1700 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 NFASCO94856 1347 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 ADCY3O60266 1144 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 BAG4O95429 457 aaKnown RBP22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 MTMR1Q13613 665 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 ACVR2BQ13705 512 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 MAP3K21Q5TCX8 1036 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 PLA2G4DQ86XP0 818 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 ETNPPLQ8TBG4 499 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 KCNH7Q9NS40 1196 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 FLRT1Q9NZU1 646 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 TSKSQ9UJT2 592 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 RCOR1Q9UKL0 485 aa22.37■■□□□ 1.17
SCAMP3-209ENST00000497470 Q9Y3F1 56 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms