RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 NTRK3Q16288 839 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 ARHGEF16Q5VV41 709 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 IL31RAQ8NI17 732 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 COPS5Q92905 334 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 VWCEQ96DN2 955 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 INPP4AQ96PE3 977 aaPredicted RBP12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 POLR3EQ9NVU0 708 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 CNTNAP5Q8WYK1 1306 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 CHD7Q9P2D1 2997 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 EYSQ5T1H1 3165 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 DCDC2CA8MYV0 355 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 EIF2AK2P19525 551 aaKnown RBP12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 RPS6KB1P23443 525 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 SP2Q02086 613 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 MYSM1Q5VVJ2 828 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 TYW1BQ6NUM6 668 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 XRRA1Q6P2D8 792 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 KCNV1Q6PIU1 500 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 SESTD1Q86VW0 696 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 CMTR1Q8N1G2 835 aaKnown RBP12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 KAT2BQ92831 832 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 BADQ92934 168 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
SHROOM3-210ENST00000497440 SPATA31C2B4DYI2 1134 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 HAS3O00219 553 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 ZBTB43O43298 467 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 PQBP1O60828 265 aaKnown RBP12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 GH1P01241 217 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 EPHB4P54760 987 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 PTPN11Q06124 597 aaPredicted RBP12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 SEMA3FQ13275 785 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 LAMC2Q13753 1193 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 LY6KQ17RY6 165 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 RASIP1Q5U651 963 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 NFRKBQ6P4R8 1299 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 USP17L6PQ6QN14 398 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 C16orf59Q7L2K0 433 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 MICU3Q86XE3 530 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 OR6J1Q8NGC5 347 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 MTG1Q9BT17 334 aaPredicted RBP12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 UBE2OQ9C0C9 1292 aaKnown RBP12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 TMEM39AQ9NV64 488 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 PRUNE2Q8WUY3 3088 aa12.58□□□□□ -0.4
SHROOM3-210ENST00000497440 CPA1P15085 419 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 ADD1P35611 737 aaKnown RBP12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 RTN1Q16799 776 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 CELF3Q5SZQ8 465 aaKnown RBP12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 PCNX4Q63HM2 1172 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 BLOC1S2Q6QNY1 142 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 SEPT14Q6ZU15 432 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 Q6ZUG5 572 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 RUFY3Q7L099 469 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 AFG1LQ8WV93 481 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 CRYGNQ8WXF5 182 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 JAKMIP1Q96N16 626 aaKnown RBP12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 LBHD1Q9BQE6 289 aaPredicted RBP12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 SENP7Q9BQF6 1050 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 PSTPIP2Q9H939 334 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 PRKAG2Q9UGJ0 569 aa12.57□□□□□ -0.4
SHROOM3-210ENST00000497440 KLF18A0A0U1RQI7 1052 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 hCG_1984214I3L0E3 225 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 B4GALT4O60513 344 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 F2P00734 622 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 MMP3P08254 477 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 RAG1P15918 1043 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 PSMA5P28066 241 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 CCND2P30279 289 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 HOXC8P31273 242 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 CLK2P49760 499 aaKnown RBP12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 PSMC6P62333 389 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 TOB2Q14106 344 aaPredicted RBP12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 SHHQ15465 462 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 PKN1Q16512 942 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 C9orf50Q5SZB4 431 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 PPP1R18Q6NYC8 613 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 SYNE3Q6ZMZ3 975 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 RAB11FIP4Q86YS3 637 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 ZNF713Q8N859 430 aaPredicted RBP12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 PPTC7Q8NI37 304 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 NOC4LQ9BVI4 516 aaKnown RBP12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 BARHL2Q9NY43 387 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 SEC63Q9UGP8 760 aaKnown RBP12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 MYH7BA7E2Y1 1941 aa12.56□□□□□ -0.4
SHROOM3-210ENST00000497440 UNC80Q8N2C7 3258 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 CCDC196A0A1B0GTZ2 297 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms