RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 FOXP4Q8IVH2 680 aaPredicted RBP6.68□□□□□ -1.34
UBE3C-208ENST00000497368 CCDC82Q8N4S0 544 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 TRPV1Q8NER1 839 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 OTUD7AQ8TE49 926 aaPredicted RBP6.68□□□□□ -1.34
UBE3C-208ENST00000497368 KIF1BPQ96EK5 621 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 DYNLL2Q96FJ2 89 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 DEFB118Q96PH6 123 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 DNAJC2Q99543 621 aaKnown RBP6.68□□□□□ -1.34
UBE3C-208ENST00000497368 HAUS7Q99871 368 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 RNF208Q9H0X6 261 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 BRD7Q9NPI1 651 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 KLF15Q9UIH9 416 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 SERPINB13Q9UIV8 391 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 RCAN3Q9UKA8 241 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 DDX19BQ9UMR2 479 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 CNTNAP5Q8WYK1 1306 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 REV3LO60673 3130 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 PRMT3O60678 531 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 MBD4O95243 580 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 ATG7O95352 703 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 HMGCRP04035 888 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 COL6A1P12109 1028 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 ATP5JP18859 108 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 CCND3P30281 292 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-208ENST00000497368 LAMC2Q13753 1193 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 ELOAQ14241 798 aaKnown RBP6.67□□□□□ -1.34
UBE3C-208ENST00000497368 RTN1Q16799 776 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 CATSPERGQ6ZRH7 1159 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 GPR142Q7Z601 462 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 RAB44Q7Z6P3 723 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-208ENST00000497368 RPAP2Q8IXW5 612 aaPredicted RBP6.67□□□□□ -1.34
UBE3C-208ENST00000497368 NPLOC4Q8TAT6 608 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 PBXIP1Q96AQ6 731 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 SLC30A3Q99726 388 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 PUS7LQ9H0K6 701 aaKnown RBP6.67□□□□□ -1.34
UBE3C-208ENST00000497368 BOLA2Q9H3K6 86 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 AS3MTQ9HBK9 375 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 GINM1Q9NU53 330 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 PAG1Q9NWQ8 432 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 KLK14Q9P0G3 267 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 OGDHLQ9ULD0 1010 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 PRR12Q9ULL5 1215 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 TACC3Q9Y6A5 838 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 CHD9Q3L8U1 2897 aa6.67□□□□□ -1.34
UBE3C-208ENST00000497368 GBF1Q92538 1859 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 C19orf81C9J6K1 198 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 RNF225M0QZC1 329 aaPredicted RBP6.66□□□□□ -1.34
UBE3C-208ENST00000497368 M0R2C6 588 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 EPXP11678 715 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 CYP2B6P20813 491 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 HOXD10P28358 340 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 USP5P45974 858 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 SNRPNP63162 240 aaKnown RBP6.66□□□□□ -1.34
UBE3C-208ENST00000497368 CACNB2Q08289 660 aaPredicted RBP6.66□□□□□ -1.34
UBE3C-208ENST00000497368 MAP3K12Q12852 859 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 GRB14Q14449 540 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 ARHGEF6Q15052 776 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 SWI5Q1ZZU3 235 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 ABCB5Q2M3G0 1257 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 SLC9C2Q5TAH2 1124 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 TMEM164Q5U3C3 297 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 ZNF468Q5VIY5 522 aaPredicted RBP6.66□□□□□ -1.34
UBE3C-208ENST00000497368 FCHSD1Q86WN1 690 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 CRACR2BQ8N4Y2 399 aaPredicted RBP6.66□□□□□ -1.34
UBE3C-208ENST00000497368 REPS2Q8NFH8 660 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 PI4K2BQ8TCG2 481 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 VTI1AQ96AJ9 217 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 SCARF2Q96GP6 870 aaPredicted RBP6.66□□□□□ -1.34
UBE3C-208ENST00000497368 PAWRQ96IZ0 340 aaKnown RBP6.66□□□□□ -1.34
UBE3C-208ENST00000497368 PAGR1Q9BTK6 254 aa6.66□□□□□ -1.34
UBE3C-208ENST00000497368 RPAP3Q9H6T3 665 aaPredicted RBP6.66□□□□□ -1.34
UBE3C-208ENST00000497368 IGKV6D-41A0A0C4DH26 115 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 RAB11FIP3O75154 756 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 HLA-DOAP06340 250 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 HOXC6P09630 235 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 XRCC5P13010 732 aaKnown RBP6.65□□□□□ -1.34
UBE3C-208ENST00000497368 AMPD1P23109 780 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 ADH6P28332 368 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 UBXN2AP68543 259 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 IRX3P78415 501 aaPredicted RBP6.65□□□□□ -1.34
UBE3C-208ENST00000497368 PDE3AQ14432 1141 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 RAB3GAP1Q15042 981 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 UBE3CQ15386 1083 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 CERKLQ49MI3 558 aaPredicted RBP6.65□□□□□ -1.34
UBE3C-208ENST00000497368 C12orf60Q5U649 245 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 TMED8Q6PL24 325 aaPredicted RBP6.65□□□□□ -1.34
UBE3C-208ENST00000497368 C16orf86Q6ZW13 317 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 RASGRP2Q7LDG7 609 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 BTLAQ7Z6A9 289 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 SYT9Q86SS6 491 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 CLASRPQ8N2M8 674 aaKnown RBP6.65□□□□□ -1.34
UBE3C-208ENST00000497368 OSBP2Q969R2 916 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 COA7Q96BR5 231 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 APBA2Q99767 749 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 GDF15Q99988 308 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 NOL10Q9BSC4 688 aaKnown RBP6.65□□□□□ -1.34
UBE3C-208ENST00000497368 FBXO28Q9NVF7 368 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 MCM9Q9NXL9 1143 aa6.65□□□□□ -1.34
UBE3C-208ENST00000497368 VCANP13611 3396 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms