RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 SKAP1Q86WV1 359 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 CCDC155Q8N6L0 562 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 NEK9Q8TD19 979 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 SCFD2Q8WU76 684 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 KAT2BQ92831 832 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 WNT8BQ93098 351 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 SNX27Q96L92 541 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 ECHDC1Q9NTX5 307 aa13.17□□□□□ -0.3
LRP8-211ENST00000496580 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 LOC102724159A0A0B4J2E5 919 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 KPNA6O60684 536 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 MMP3P08254 477 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 CKBP12277 381 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
LRP8-211ENST00000496580 PWP2Q15269 919 aaKnown RBP13.16□□□□□ -0.3
LRP8-211ENST00000496580 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 TRAF7Q6Q0C0 670 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 PLEKHM2Q8IWE5 1019 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 FBXO22Q8NEZ5 403 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 AFG1LQ8WV93 481 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 NAPBQ9H115 298 aa13.16□□□□□ -0.3
LRP8-211ENST00000496580 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 FOXP2O15409 715 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 MX1P20591 662 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 ZP2Q05996 745 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 RBL2Q08999 1139 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 MBTPS1Q14703 1052 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 BTNL9Q6UXG8 535 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 HFE2Q6ZVN8 426 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 SESTD1Q86VW0 696 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 UPF2Q9HAU5 1272 aaKnown RBP13.15□□□□□ -0.3
LRP8-211ENST00000496580 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 ZNF318Q5VUA4 2279 aa13.15□□□□□ -0.3
LRP8-211ENST00000496580 ABHD14A-ACY1A0A1B0GW23 586 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
LRP8-211ENST00000496580 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
LRP8-211ENST00000496580 NOVP48745 357 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 PDE1AP54750 535 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 LY6KQ17RY6 165 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 TRIM71Q2Q1W2 868 aaKnown RBP13.14□□□□□ -0.31
LRP8-211ENST00000496580 TCEAL5Q5H9L2 206 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 CCDC62Q6P9F0 684 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 CASC1Q6TDU7 716 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
LRP8-211ENST00000496580 NACAP1Q9BZK3 213 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 GTF2IRD1Q9UHL9 959 aa13.14□□□□□ -0.31
LRP8-211ENST00000496580 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
LRP8-211ENST00000496580 NLRC5Q86WI3 1866 aa13.13□□□□□ -0.31
LRP8-211ENST00000496580 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
LRP8-211ENST00000496580 ZNF200P98182 395 aaPredicted RBP13.13□□□□□ -0.31
LRP8-211ENST00000496580 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
LRP8-211ENST00000496580 IKBKEQ14164 716 aa13.13□□□□□ -0.31
LRP8-211ENST00000496580 TTC22Q5TAA0 569 aa13.13□□□□□ -0.31
LRP8-211ENST00000496580 MYOCDQ8IZQ8 938 aa13.13□□□□□ -0.31
LRP8-211ENST00000496580 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
LRP8-211ENST00000496580 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 IRS1P35568 1242 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 PSEN2P49810 448 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 HTRA4P83105 476 aaPredicted RBP13.12□□□□□ -0.31
LRP8-211ENST00000496580 HIC1Q14526 733 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
LRP8-211ENST00000496580 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 SEPT14Q6ZU15 432 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 DNERQ8NFT8 737 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
LRP8-211ENST00000496580 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 KCNH6Q9H252 994 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 INSL6Q9Y581 213 aa13.12□□□□□ -0.31
LRP8-211ENST00000496580 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 EFCAB14O75071 495 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 LGR5O75473 907 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 PARNO95453 639 aaKnown RBP13.11□□□□□ -0.31
LRP8-211ENST00000496580 GH1P01241 217 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 ZNF286BP0CG31 522 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 PTK7Q13308 1070 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 CLUL1Q15846 466 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 USH1GQ495M9 461 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 TIGD5Q53EQ6 642 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 DBF4BQ8NFT6 615 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 TBC1D5Q92609 795 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 PABPC5Q96DU9 382 aaKnown RBP13.11□□□□□ -0.31
LRP8-211ENST00000496580 MPHOSPH6Q99547 160 aaKnown RBP13.11□□□□□ -0.31
LRP8-211ENST00000496580 OSBPL7Q9BZF2 842 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 CLDND1Q9NY35 253 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms