RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 B4DLN1 442 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 ZEB2O60315 1214 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 CD4P01730 458 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 MMP3P08254 477 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 CPT1AP50416 773 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 MRPL12P52815 198 aaKnown RBP14.11□□□□□ -0.15
HDLBP-246ENST00000496569 APOBRQ0VD83 1088 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 LRIT3Q3SXY7 679 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 FAM47CQ5HY64 1035 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 FANCBQ8NB91 859 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 IWS1Q96ST2 819 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 BCAS3Q9H6U6 928 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 TRMT13Q9NUP7 481 aaKnown RBP14.11□□□□□ -0.15
HDLBP-246ENST00000496569 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 SEC63Q9UGP8 760 aaKnown RBP14.11□□□□□ -0.15
HDLBP-246ENST00000496569 DDX41Q9UJV9 622 aaKnown RBP14.11□□□□□ -0.15
HDLBP-246ENST00000496569 MRVI1Q9Y6F6 885 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 MROH7Q68CQ1 1323 aa14.11□□□□□ -0.15
HDLBP-246ENST00000496569 NKRFO15226 690 aaKnown RBP eCLIP14.1□□□□□ -0.155e-7■■□□□ 12.2
HDLBP-246ENST00000496569 TLR3O15455 904 aaKnown RBP14.1□□□□□ -0.15
HDLBP-246ENST00000496569 ZBTB43O43298 467 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 PPFIA3O75145 1194 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 TIMP1P01033 207 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 GH1P01241 217 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 ACRP10323 421 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 CYP2C9P11712 490 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 CSF2RAP15509 400 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 CDC27P30260 824 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 HSPA4P34932 840 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 GNAQP50148 359 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 FPGSQ05932 587 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 RTN1Q16799 776 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 NBPF20Q3BBV1 942 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 TSGA10IPQ3SY00 556 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 TYW1BQ6NUM6 668 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 Q6ZUG5 572 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 TMTC2Q8N394 836 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 KCNB2Q92953 911 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 MTG1Q9BT17 334 aaPredicted RBP14.1□□□□□ -0.15
HDLBP-246ENST00000496569 POLR3EQ9NVU0 708 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 RTEL1Q9NZ71 1219 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 TELO2Q9Y4R8 837 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 COL6A3P12111 3177 aa14.1□□□□□ -0.15
HDLBP-246ENST00000496569 KAT6AQ92794 2004 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 A6NJR5 290 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 MEIS2O14770 477 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 EIF3JO75822 258 aaKnown RBP14.09□□□□□ -0.15
HDLBP-246ENST00000496569 CABYRO75952 493 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 ZNF286BP0CG31 522 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 CALM1P0DP23 149 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 CALM2P0DP24 149 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 CALM3P0DP25 149 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 CCND2P30279 289 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 CCL23P55773 120 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 MRPS9P82933 396 aaKnown RBP14.09□□□□□ -0.15
HDLBP-246ENST00000496569 SP2Q02086 613 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 SEMA3FQ13275 785 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 WWC2Q6AWC2 1192 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 HEATR3Q7Z4Q2 680 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 SMARCC2Q8TAQ2 1214 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 PGBD1Q96JS3 809 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDLBP-246ENST00000496569 WNT8AQ9H1J5 351 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 ALDH8A1Q9H2A2 487 aaPredicted RBP14.09□□□□□ -0.15
HDLBP-246ENST00000496569 FAM217BQ9NTX9 383 aaPredicted RBP14.09□□□□□ -0.15
HDLBP-246ENST00000496569 PTPRSQ13332 1948 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 FRMPD4Q14CM0 1322 aa14.09□□□□□ -0.15
HDLBP-246ENST00000496569 GGPS1O95749 300 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 UBA1P22314 1058 aaKnown RBP14.08□□□□□ -0.16
HDLBP-246ENST00000496569 FUT2Q10981 343 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 KRT32Q14532 448 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 FAM109BQ6ICB4 259 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-246ENST00000496569 MFSD5Q6N075 450 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 SYNE3Q6ZMZ3 975 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 C16orf59Q7L2K0 433 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 VSIG10LQ86VR7 867 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 KAT2BQ92831 832 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 BRF1Q92994 677 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 SCLYQ96I15 445 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 RNPC3Q96LT9 517 aaKnown RBP14.08□□□□□ -0.16
HDLBP-246ENST00000496569 FAM161BQ96MY7 647 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 LZTS2Q9BRK4 669 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 LARP6Q9BRS8 491 aaKnown RBP14.08□□□□□ -0.16
HDLBP-246ENST00000496569 NOC4LQ9BVI4 516 aaKnown RBP14.08□□□□□ -0.16
HDLBP-246ENST00000496569 MAF1Q9H063 256 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 HIPK3Q9H422 1215 aa14.08□□□□□ -0.16
HDLBP-246ENST00000496569 CDH23Q9H251 3354 aa14.07□□□□□ -0.16
HDLBP-246ENST00000496569 CASTP20810 708 aaKnown RBP14.07□□□□□ -0.16
HDLBP-246ENST00000496569 RPS6KB1P23443 525 aa14.07□□□□□ -0.16
HDLBP-246ENST00000496569 SMARCA1P28370 1054 aa14.07□□□□□ -0.16
HDLBP-246ENST00000496569 ADD1P35611 737 aaKnown RBP14.07□□□□□ -0.16
HDLBP-246ENST00000496569 FGD1P98174 961 aa14.07□□□□□ -0.16
HDLBP-246ENST00000496569 HSDL1Q3SXM5 330 aa14.07□□□□□ -0.16
HDLBP-246ENST00000496569 BLOC1S2Q6QNY1 142 aa14.07□□□□□ -0.16
HDLBP-246ENST00000496569 DHX37Q8IY37 1157 aaKnown RBP14.07□□□□□ -0.16
HDLBP-246ENST00000496569 ALG1Q9BT22 464 aa14.07□□□□□ -0.16
HDLBP-246ENST00000496569 MAP3K20Q9NYL2 800 aaKnown RBP14.07□□□□□ -0.16
HDLBP-246ENST00000496569 ADAMTS3O15072 1205 aa14.06□□□□□ -0.16
HDLBP-246ENST00000496569 REC8O95072 547 aa14.06□□□□□ -0.16
HDLBP-246ENST00000496569 SP4Q02446 784 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms