RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 PDIA5Q14554 519 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 SLC15A2Q16348 729 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 ZNF662Q6ZS27 426 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 CTAGE6Q86UF2 777 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 CNKSR1Q969H4 720 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 CDK5RAP3Q96JB5 506 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 PNKPQ96T60 521 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 RIC8AQ9NPQ8 531 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 TFR2Q9UP52 801 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 UBE2SQ16763 222 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 PPP1R18Q6NYC8 613 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 HNRNPLLQ8WVV9 542 aaKnown RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 RAD54LQ92698 747 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 CCDC17Q96LX7 622 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 PCMTD1Q96MG8 357 aaPredicted RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 NUDT12Q9BQG2 462 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 IDI2Q9BXS1 227 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 DHX36Q9H2U1 1008 aaKnown RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 ZNHIT6Q9NWK9 470 aaKnown RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 C10orf71Q711Q0 1435 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 GREB1LQ9C091 1923 aaPredicted RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 A0A1W2PQJ5 194 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 POTEMA6NI47 508 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 CYLC1P35663 651 aaPredicted RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 TNNI2P48788 182 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 HDLBPQ00341 1268 aaKnown RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 EN1Q05925 392 aaPredicted RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 CERKLQ49MI3 558 aaPredicted RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 FIGNQ5HY92 759 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 CCDC122Q5T0U0 273 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 DYMQ7RTS9 669 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 TRAPPC11Q7Z392 1133 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 BBXQ8WY36 941 aaPredicted RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 NHEJ1Q9H9Q4 299 aaPredicted RBP16.63■□□□□ 0.25
UBXN11-216ENST00000496466 PI4KBQ9UBF8 816 aa16.63■□□□□ 0.25
UBXN11-216ENST00000496466 SIPA1L1O43166 1804 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 SMC1AQ14683 1233 aaKnown RBP16.62■□□□□ 0.25
UBXN11-216ENST00000496466 FKBP15Q5T1M5 1219 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
UBXN11-216ENST00000496466 CCDC170Q8IYT3 715 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 SNX29Q8TEQ0 813 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 TDRD3Q9H7E2 651 aaKnown RBP16.62■□□□□ 0.25
UBXN11-216ENST00000496466 SERPINA10Q9UK55 444 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
UBXN11-216ENST00000496466 POLR3GO15318 223 aaPredicted RBP16.62■□□□□ 0.25
UBXN11-216ENST00000496466 CLK2P49760 499 aaKnown RBP16.62■□□□□ 0.25
UBXN11-216ENST00000496466 TMEM119Q4V9L6 283 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 BEND6Q5SZJ8 279 aaPredicted RBP16.62■□□□□ 0.25
UBXN11-216ENST00000496466 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 NCAPH2Q6IBW4 605 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 KIAA1328Q86T90 577 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 JAKMIP2Q96AA8 810 aa16.62■□□□□ 0.25
UBXN11-216ENST00000496466 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
UBXN11-216ENST00000496466 RCCD1A6NED2 376 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 MAP2K7O14733 419 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 ZBTB5O15062 677 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 RHOXF2BP0C7M4 288 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 OAS2P29728 719 aaKnown RBP16.61■□□□□ 0.25
UBXN11-216ENST00000496466 SEPT2Q15019 361 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 VWA3BQ502W6 1294 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 KCNK18Q7Z418 384 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 GUF1Q8N442 669 aaKnown RBP16.61■□□□□ 0.25
UBXN11-216ENST00000496466 RHOXF2Q9BQY4 288 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 MYH4Q9Y623 1939 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
UBXN11-216ENST00000496466 YDJCA8MPS7 323 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 ENC1O14682 589 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 C21orf2O43822 256 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 CDK17Q00537 523 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 SIAH1Q8IUQ4 282 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 NOA1Q8NC60 698 aaKnown RBP16.61■□□□□ 0.25
UBXN11-216ENST00000496466 MTMR8Q96EF0 704 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 PDGFDQ9GZP0 370 aaPredicted RBP16.61■□□□□ 0.25
UBXN11-216ENST00000496466 LACRTQ9GZZ8 138 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
UBXN11-216ENST00000496466 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
UBXN11-216ENST00000496466 KRT86O43790 486 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 GDF11O95390 407 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 ATP1A1P05023 1023 aaKnown RBP16.6■□□□□ 0.25
UBXN11-216ENST00000496466 ECM1Q16610 540 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 TATDN1Q6P1N9 297 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 DDX12PQ92771 950 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 HAS1Q92839 578 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 CUL5Q93034 780 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 CAMKK2Q96RR4 588 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 KANSL2Q9H9L4 492 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 STK32BQ9NY57 414 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 DDX25Q9UHL0 483 aaKnown RBP16.6■□□□□ 0.25
UBXN11-216ENST00000496466 SIK3Q9Y2K2 1263 aa16.6■□□□□ 0.25
UBXN11-216ENST00000496466 PPIP5K2O43314 1243 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 IDEP14735 1019 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 EHHADHQ08426 723 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 PAPD7Q5XG87 772 aaKnown RBP16.59■□□□□ 0.25
UBXN11-216ENST00000496466 MKL1Q969V6 931 aa16.59■□□□□ 0.25
UBXN11-216ENST00000496466 IQCDQ96DY2 449 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms