RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 PUM1Q14671 1186 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■■□□ 15.7
ATG3-209ENST00000496423 SLFN13Q68D06 897 aa13.91□□□□□ -0.18
ATG3-209ENST00000496423 DBF4BQ8NFT6 615 aa13.91□□□□□ -0.18
ATG3-209ENST00000496423 STAG1Q8WVM7 1258 aa13.91□□□□□ -0.18
ATG3-209ENST00000496423 RPGRIP1Q96KN7 1286 aa13.91□□□□□ -0.18
ATG3-209ENST00000496423 KATNAL1Q9BW62 490 aa13.91□□□□□ -0.18
ATG3-209ENST00000496423 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
ATG3-209ENST00000496423 ARPP21Q9UBL0 812 aaPredicted RBP13.91□□□□□ -0.18
ATG3-209ENST00000496423 FAM186AA6NE01 2351 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 MED19A0JLT2 244 aaPredicted RBP13.9□□□□□ -0.18
ATG3-209ENST00000496423 IPO8O15397 1037 aaKnown RBP13.9□□□□□ -0.18
ATG3-209ENST00000496423 TBX10O75333 385 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 TTLL1O95922 423 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 BMPR1AP36894 532 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 ATP8B2P98198 1209 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 PTPN21Q16825 1174 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 CTR9Q6PD62 1173 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 FRMD5Q7Z6J6 570 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 MIER1Q8N108 512 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 SSH3Q8TE77 659 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 SEPT8Q92599 483 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 IL17RAQ96F46 866 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
ATG3-209ENST00000496423 GTF2IRD1Q9UHL9 959 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
ATG3-209ENST00000496423 DDX49Q9Y6V7 483 aaKnown RBP13.9□□□□□ -0.18
ATG3-209ENST00000496423 TCRBV5S4A2TA0A5A2 114 aa13.89□□□□□ -0.19
ATG3-209ENST00000496423 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
ATG3-209ENST00000496423 COASYQ13057 564 aa13.89□□□□□ -0.19
ATG3-209ENST00000496423 TCTN1Q2MV58 587 aa13.89□□□□□ -0.19
ATG3-209ENST00000496423 ZNF618Q5T7W0 954 aa13.89□□□□□ -0.19
ATG3-209ENST00000496423 ERC1Q8IUD2 1116 aa13.89□□□□□ -0.19
ATG3-209ENST00000496423 FAM9BQ8IZU0 186 aa13.89□□□□□ -0.19
ATG3-209ENST00000496423 DHX38Q92620 1227 aaKnown RBP13.89□□□□□ -0.19
ATG3-209ENST00000496423 MSLNLQ96KJ4 702 aa13.89□□□□□ -0.19
ATG3-209ENST00000496423 CCPG1Q9ULG6 757 aa13.89□□□□□ -0.19
ATG3-209ENST00000496423 NOP58Q9Y2X3 529 aaKnown RBP13.89□□□□□ -0.19
ATG3-209ENST00000496423 RIF1Q5UIP0 2472 aaKnown RBP13.88□□□□□ -0.19
ATG3-209ENST00000496423 CACNA1HO95180 2353 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 PTPDC1A2A3K4 754 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 RSPH10B2B2RC85 870 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 GOLIM4O00461 696 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 PLA2G6O60733 806 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 RSPH10BP0C881 870 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 RASA1P20936 1047 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 SLC1A4P43007 532 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 BAATQ14032 418 aaPredicted RBP13.88□□□□□ -0.19
ATG3-209ENST00000496423 MUM1L1Q5H9M0 696 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 AACSQ86V21 672 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 SMRP1Q8NCR6 262 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 KCNG4Q8TDN1 519 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 CNTNAP3BQ96NU0 1288 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 IFIH1Q9BYX4 1025 aaKnown RBP13.88□□□□□ -0.19
ATG3-209ENST00000496423 CNTNAP3Q9BZ76 1288 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 SEMA4AQ9H3S1 761 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 INCENPQ9NQS7 918 aa13.88□□□□□ -0.19
ATG3-209ENST00000496423 GREB1LQ9C091 1923 aaPredicted RBP13.88□□□□□ -0.19
ATG3-209ENST00000496423 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 LINC01565O15544 149 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 BCAR3O75815 825 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 ATF7P17544 494 aaPredicted RBP13.87□□□□□ -0.19
ATG3-209ENST00000496423 DGKDQ16760 1214 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 PLEKHG4Q58EX7 1191 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 DHX37Q8IY37 1157 aaKnown RBP13.87□□□□□ -0.19
ATG3-209ENST00000496423 UBALD2Q8IYN6 164 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 EFHBQ8N7U6 833 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 DNAJC2Q99543 621 aaKnown RBP13.87□□□□□ -0.19
ATG3-209ENST00000496423 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 MTMR4Q9NYA4 1195 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 HDAC6Q9UBN7 1215 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 PNMA2Q9UL42 364 aa13.87□□□□□ -0.19
ATG3-209ENST00000496423 GRM6O15303 877 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 GH1P01241 217 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 MMP1P03956 469 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 MMP3P08254 477 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 SBK1Q52WX2 424 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 ZSCAN25Q6NSZ9 544 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 DNERQ8NFT8 737 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 APBB2Q92870 758 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 COPS5Q92905 334 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 RMDN1Q96DB5 314 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 CTAGE1Q96RT6 745 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 ALG1Q9BT22 464 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 MFSD1Q9H3U5 465 aa13.86□□□□□ -0.19
ATG3-209ENST00000496423 USP15Q9Y4E8 981 aaPredicted RBP13.86□□□□□ -0.19
ATG3-209ENST00000496423 MINDY4BA8MYZ0 360 aa13.85□□□□□ -0.19
ATG3-209ENST00000496423 ICAM1P05362 532 aa13.85□□□□□ -0.19
ATG3-209ENST00000496423 GTF2F1P35269 517 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATG3-209ENST00000496423 ADD2P35612 726 aa13.85□□□□□ -0.19
ATG3-209ENST00000496423 THPOP40225 353 aa13.85□□□□□ -0.19
ATG3-209ENST00000496423 PSEN2P49810 448 aa13.85□□□□□ -0.19
ATG3-209ENST00000496423 NAALADL2Q58DX5 795 aa13.85□□□□□ -0.19
ATG3-209ENST00000496423 ASTLQ6HA08 431 aaPredicted RBP13.85□□□□□ -0.19
ATG3-209ENST00000496423 RCSD1Q6JBY9 416 aa13.85□□□□□ -0.19
ATG3-209ENST00000496423 STK11IPQ8N1F8 1099 aa13.85□□□□□ -0.19
ATG3-209ENST00000496423 AFG1LQ8WV93 481 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms