RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 USP17L6PQ6QN14 398 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 VSIG10LQ86VR7 867 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 TDHQ8IZJ6 230 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 SLC43A3Q8NBI5 491 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 BRF1Q92994 677 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 USP26Q9BXU7 913 aa16.71■□□□□ 0.27
PDAP1-204ENST00000496335 A6NJR5 290 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 GOLGA8AA7E2F4 631 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 GOLGA8BA8MQT2 603 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 SOX1O00570 391 aaPredicted RBP16.7■□□□□ 0.26
PDAP1-204ENST00000496335 RAG1P15918 1043 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
PDAP1-204ENST00000496335 RPS6KB1P23443 525 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 CDC27P30260 824 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 FAM126BQ8IXS8 530 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 GPKOWQ92917 476 aaPredicted RBP eCLIP16.7■□□□□ 0.265e-7■■■□□ 16.1
PDAP1-204ENST00000496335 FAM217BQ9NTX9 383 aaPredicted RBP16.7■□□□□ 0.26
PDAP1-204ENST00000496335 POLR3EQ9NVU0 708 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 RBM28Q9NW13 759 aaKnown RBP16.7■□□□□ 0.26
PDAP1-204ENST00000496335 DDX41Q9UJV9 622 aaKnown RBP16.7■□□□□ 0.26
PDAP1-204ENST00000496335 MROH7Q68CQ1 1323 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 CNTNAP5Q8WYK1 1306 aa16.7■□□□□ 0.26
PDAP1-204ENST00000496335 SCN10AQ9Y5Y9 1956 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 MEIS2O14770 477 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 GH1P01241 217 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 CCND2P30279 289 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 ARHGAP1Q07960 439 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 FUT2Q10981 343 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 BRDTQ58F21 947 aaPredicted RBP16.69■□□□□ 0.26
PDAP1-204ENST00000496335 HEATR3Q7Z4Q2 680 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 PPP1R13LQ8WUF5 828 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 CUL5Q93034 780 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 TBX21Q9UL17 535 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 MRVI1Q9Y6F6 885 aa16.69■□□□□ 0.26
PDAP1-204ENST00000496335 EPB41L2O43491 1005 aaKnown RBP16.68■□□□□ 0.26
PDAP1-204ENST00000496335 SORBS3O60504 671 aa16.68■□□□□ 0.26
PDAP1-204ENST00000496335 CD4P01730 458 aa16.68■□□□□ 0.26
PDAP1-204ENST00000496335 PSMA5P28066 241 aa16.68■□□□□ 0.26
PDAP1-204ENST00000496335 ADD1P35611 737 aaKnown RBP16.68■□□□□ 0.26
PDAP1-204ENST00000496335 LRCH3Q96II8 777 aa16.68■□□□□ 0.26
PDAP1-204ENST00000496335 MTG1Q9BT17 334 aaPredicted RBP16.68■□□□□ 0.26
PDAP1-204ENST00000496335 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
PDAP1-204ENST00000496335 PSTPIP2Q9H939 334 aa16.68■□□□□ 0.26
PDAP1-204ENST00000496335 V9GY48 417 aaPredicted RBP16.68■□□□□ 0.26
PDAP1-204ENST00000496335 PIK3CDO00329 1044 aa16.67■□□□□ 0.26
PDAP1-204ENST00000496335 TLR3O15455 904 aaKnown RBP16.67■□□□□ 0.26
PDAP1-204ENST00000496335 METAP2P50579 478 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDAP1-204ENST00000496335 MRPS9P82933 396 aaKnown RBP16.67■□□□□ 0.26
PDAP1-204ENST00000496335 UBE2SQ16763 222 aa16.67■□□□□ 0.26
PDAP1-204ENST00000496335 WWC2Q6AWC2 1192 aa16.67■□□□□ 0.26
PDAP1-204ENST00000496335 RTEL1Q9NZ71 1219 aa16.67■□□□□ 0.26
PDAP1-204ENST00000496335 LAMA2P24043 3122 aaKnown RBP16.67■□□□□ 0.26
PDAP1-204ENST00000496335 DOCK5Q9H7D0 1870 aa16.67■□□□□ 0.26
PDAP1-204ENST00000496335 FRMPD4Q14CM0 1322 aa16.67■□□□□ 0.26
PDAP1-204ENST00000496335 B4GALT4O60513 344 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 KPNA6O60684 536 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 TIMP1P01033 207 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 MMP3P08254 477 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 RCAN1P53805 252 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 EPHB4P54760 987 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 CHMP4BP1P59074 171 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 SP2Q02086 613 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 SHHQ15465 462 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 NBPF20Q3BBV1 942 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 C9orf50Q5SZB4 431 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 TYW1BQ6NUM6 668 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 RUFY3Q7L099 469 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 DHX37Q8IY37 1157 aaKnown RBP16.66■□□□□ 0.26
PDAP1-204ENST00000496335 AGXT2Q9BYV1 514 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 PPP1R12CQ9BZL4 782 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
PDAP1-204ENST00000496335 BCAS3Q9H6U6 928 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 ZSWIM6Q9HCJ5 1215 aa16.66■□□□□ 0.26
PDAP1-204ENST00000496335 FPGSQ05932 587 aa16.65■□□□□ 0.26
PDAP1-204ENST00000496335 LAMC2Q13753 1193 aa16.65■□□□□ 0.26
PDAP1-204ENST00000496335 LRIT3Q3SXY7 679 aa16.65■□□□□ 0.26
PDAP1-204ENST00000496335 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
PDAP1-204ENST00000496335 FBXL16Q8N461 479 aa16.65■□□□□ 0.26
PDAP1-204ENST00000496335 SEZ6LQ9BYH1 1024 aa16.65■□□□□ 0.26
PDAP1-204ENST00000496335 UPF3BQ9BZI7 483 aaKnown RBP16.65■□□□□ 0.26
PDAP1-204ENST00000496335 TRMT13Q9NUP7 481 aaKnown RBP16.65■□□□□ 0.26
PDAP1-204ENST00000496335 STXBP3O00186 592 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 PPFIA3O75145 1194 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 GGPS1O95749 300 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 UBA1P22314 1058 aaKnown RBP16.64■□□□□ 0.25
PDAP1-204ENST00000496335 CYP2C18P33260 490 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 NAPAP54920 295 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 TOB2Q14106 344 aaPredicted RBP16.64■□□□□ 0.25
PDAP1-204ENST00000496335 CELF3Q5SZQ8 465 aaKnown RBP16.64■□□□□ 0.25
PDAP1-204ENST00000496335 MYSM1Q5VVJ2 828 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 KCNV1Q6PIU1 500 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 KAT2BQ92831 832 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 EMID1Q96A84 441 aaPredicted RBP16.64■□□□□ 0.25
PDAP1-204ENST00000496335 INPP4AQ96PE3 977 aaPredicted RBP16.64■□□□□ 0.25
PDAP1-204ENST00000496335 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
PDAP1-204ENST00000496335 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
PDAP1-204ENST00000496335 UMODL1Q5DID0 1318 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms