RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 MYH6P13533 1939 aa13.68□□□□□ -0.22
THBS3-208ENST00000496332 B4GALT4O60513 344 aa13.67□□□□□ -0.22
THBS3-208ENST00000496332 RGS20O76081 388 aa13.67□□□□□ -0.22
THBS3-208ENST00000496332 CYP2C18P33260 490 aa13.67□□□□□ -0.22
THBS3-208ENST00000496332 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
THBS3-208ENST00000496332 CCDC82Q8N4S0 544 aa13.67□□□□□ -0.22
THBS3-208ENST00000496332 IL31RAQ8NI17 732 aa13.67□□□□□ -0.22
THBS3-208ENST00000496332 AFG1LQ8WV93 481 aa13.67□□□□□ -0.22
THBS3-208ENST00000496332 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
THBS3-208ENST00000496332 ALDH8A1Q9H2A2 487 aaPredicted RBP13.67□□□□□ -0.22
THBS3-208ENST00000496332 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
THBS3-208ENST00000496332 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 MMP3P08254 477 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 HMGB1P09429 215 aaKnown RBP13.66□□□□□ -0.22
THBS3-208ENST00000496332 CCND2P30279 289 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 TMTC3Q6ZXV5 915 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 Q7L0L9 218 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 TMEM199Q8N511 208 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 DEFB123Q8N688 67 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 KCNB2Q92953 911 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 TRMT13Q9NUP7 481 aaKnown RBP13.66□□□□□ -0.22
THBS3-208ENST00000496332 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
THBS3-208ENST00000496332 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
THBS3-208ENST00000496332 ZBTB43O43298 467 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 CSF2RAP15509 400 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 HSPA4P34932 840 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 CHMP4BP1P59074 171 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 PPIGQ13427 754 aaKnown RBP eCLIP13.65□□□□□ -0.22
THBS3-208ENST00000496332 LAMC2Q13753 1193 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 FAM47CQ5HY64 1035 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 KCNV1Q6PIU1 500 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 USP17L6PQ6QN14 398 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 C16orf59Q7L2K0 433 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
THBS3-208ENST00000496332 SMARCC2Q8TAQ2 1214 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 CUL5Q93034 780 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 EMID1Q96A84 441 aaPredicted RBP13.65□□□□□ -0.22
THBS3-208ENST00000496332 RNPC3Q96LT9 517 aaKnown RBP13.65□□□□□ -0.22
THBS3-208ENST00000496332 NOC4LQ9BVI4 516 aaKnown RBP13.65□□□□□ -0.22
THBS3-208ENST00000496332 SNX14Q9Y5W7 946 aa13.65□□□□□ -0.22
THBS3-208ENST00000496332 FRMPD4Q14CM0 1322 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 KLF18A0A0U1RQI7 1052 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 MEIS2O14770 477 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 SORBS3O60504 671 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 REC8O95072 547 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 SUPT20HL2P0C7V6 817 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 CPA1P15085 419 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
THBS3-208ENST00000496332 CCL23P55773 120 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 FGD1P98174 961 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 DGKDQ16760 1214 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 NFRKBQ6P4R8 1299 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 JAKMIP1Q96N16 626 aaKnown RBP13.64□□□□□ -0.23
THBS3-208ENST00000496332 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.23
THBS3-208ENST00000496332 PSTPIP2Q9H939 334 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 RBM28Q9NW13 759 aaKnown RBP13.64□□□□□ -0.23
THBS3-208ENST00000496332 PPP4R2Q9NY27 417 aa13.64□□□□□ -0.23
THBS3-208ENST00000496332 GGPS1O95749 300 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 ACRP10323 421 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 TGFB3P10600 412 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 CYP2C9P11712 490 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 MRPS9P82933 396 aaKnown RBP13.63□□□□□ -0.23
THBS3-208ENST00000496332 SP2Q02086 613 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
THBS3-208ENST00000496332 RTN1Q16799 776 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 TMEM240Q5SV17 173 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 CELF3Q5SZQ8 465 aaKnown RBP13.63□□□□□ -0.23
THBS3-208ENST00000496332 MYSM1Q5VVJ2 828 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 HEATR3Q7Z4Q2 680 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 PPTC7Q8NI37 304 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 KAT2BQ92831 832 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 GPKOWQ92917 476 aaPredicted RBP eCLIP13.63□□□□□ -0.23
THBS3-208ENST00000496332 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
THBS3-208ENST00000496332 NAP1L2Q9ULW6 460 aaPredicted RBP13.63□□□□□ -0.23
THBS3-208ENST00000496332 GOLGA8AA7E2F4 631 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 GOLGA8BA8MQT2 603 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 STAM2O75886 525 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 UBA1P22314 1058 aaKnown RBP13.62□□□□□ -0.23
THBS3-208ENST00000496332 SMAD3P84022 425 aaKnown RBP13.62□□□□□ -0.23
THBS3-208ENST00000496332 HSDL1Q3SXM5 330 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 GNPTABQ3T906 1256 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 FAM109BQ6ICB4 259 aaPredicted RBP13.62□□□□□ -0.23
THBS3-208ENST00000496332 BLOC1S2Q6QNY1 142 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 Q6ZUG5 572 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 ZNF365Q70YC5 407 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 SPATA33Q96N06 139 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 WNT8AQ9H1J5 351 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 MLXIPQ9HAP2 919 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 MTMR10Q9NXD2 777 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
THBS3-208ENST00000496332 CNTNAP5Q8WYK1 1306 aa13.62□□□□□ -0.23
THBS3-208ENST00000496332 KIAA1217Q5T5P2 1943 aa13.61□□□□□ -0.23
THBS3-208ENST00000496332 SPATA31C2B4DYI2 1134 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms