RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 CCDC62Q6P9F0 684 aa24.46■■□□□ 1.51
PPM1F-208ENST00000496143 TEX2Q8IWB9 1127 aa24.46■■□□□ 1.51
PPM1F-208ENST00000496143 PRO3102Q9H379 93 aa24.46■■□□□ 1.51
PPM1F-208ENST00000496143 PDLIM7Q9NR12 457 aa24.46■■□□□ 1.51
PPM1F-208ENST00000496143 hCG_1642624A0A1W2PR95 340 aa24.45■■□□□ 1.5
PPM1F-208ENST00000496143 PTGS1P23219 599 aa24.45■■□□□ 1.5
PPM1F-208ENST00000496143 PPP1R18Q6NYC8 613 aa24.45■■□□□ 1.5
PPM1F-208ENST00000496143 V9GY48 417 aaPredicted RBP24.45■■□□□ 1.5
PPM1F-208ENST00000496143 NID2Q14112 1375 aa24.44■■□□□ 1.5
PPM1F-208ENST00000496143 FRMPD4Q14CM0 1322 aa24.44■■□□□ 1.5
PPM1F-208ENST00000496143 TLR3O15455 904 aaKnown RBP24.44■■□□□ 1.5
PPM1F-208ENST00000496143 ARIH2O95376 493 aa24.44■■□□□ 1.5
PPM1F-208ENST00000496143 CDC27P30260 824 aa24.44■■□□□ 1.5
PPM1F-208ENST00000496143 FUT2Q10981 343 aa24.44■■□□□ 1.5
PPM1F-208ENST00000496143 GNPTABQ3T906 1256 aa24.44■■□□□ 1.5
PPM1F-208ENST00000496143 XRRA1Q6P2D8 792 aa24.44■■□□□ 1.5
PPM1F-208ENST00000496143 USP17L6PQ6QN14 398 aa24.44■■□□□ 1.5
PPM1F-208ENST00000496143 GPKOWQ92917 476 aaPredicted RBP eCLIP24.44■■□□□ 1.5
PPM1F-208ENST00000496143 A6NJR5 290 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 MEIS2O14770 477 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 MYL3P08590 195 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 CDK7P50613 346 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 NAPAP54920 295 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 ANAPC15P60006 121 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 ITGA7Q13683 1181 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 LY6KQ17RY6 165 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 COPS5Q92905 334 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 UBE2OQ9C0C9 1292 aaKnown RBP24.43■■□□□ 1.5
PPM1F-208ENST00000496143 GLT8D2Q9H1C3 349 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 EHMT1Q9H9B1 1298 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 FAM217BQ9NTX9 383 aaPredicted RBP24.43■■□□□ 1.5
PPM1F-208ENST00000496143 TMEM39AQ9NV64 488 aa24.43■■□□□ 1.5
PPM1F-208ENST00000496143 DDX41Q9UJV9 622 aaKnown RBP24.43■■□□□ 1.5
PPM1F-208ENST00000496143 SPDYE3A6NKU9 549 aa24.42■■□□□ 1.5
PPM1F-208ENST00000496143 TGFB3P10600 412 aa24.42■■□□□ 1.5
PPM1F-208ENST00000496143 ADD1P35611 737 aaKnown RBP24.42■■□□□ 1.5
PPM1F-208ENST00000496143 EVCP57679 992 aa24.42■■□□□ 1.5
PPM1F-208ENST00000496143 PURAQ00577 322 aaKnown RBP24.42■■□□□ 1.5
PPM1F-208ENST00000496143 MDM2Q00987 491 aaPredicted RBP24.42■■□□□ 1.5
PPM1F-208ENST00000496143 WWC2Q6AWC2 1192 aa24.42■■□□□ 1.5
PPM1F-208ENST00000496143 IL31RAQ8NI17 732 aa24.42■■□□□ 1.5
PPM1F-208ENST00000496143 MTG1Q9BT17 334 aaPredicted RBP24.42■■□□□ 1.5
PPM1F-208ENST00000496143 AKAP17AQ02040 695 aaKnown RBP24.41■■□□□ 1.5
PPM1F-208ENST00000496143 LAMC2Q13753 1193 aa24.41■■□□□ 1.5
PPM1F-208ENST00000496143 DHX37Q8IY37 1157 aaKnown RBP24.41■■□□□ 1.5
PPM1F-208ENST00000496143 UPF3BQ9BZI7 483 aaKnown RBP24.41■■□□□ 1.5
PPM1F-208ENST00000496143 PDRG1Q9NUG6 133 aa24.41■■□□□ 1.5
PPM1F-208ENST00000496143 DNAH12Q6ZR08 3092 aa24.41■■□□□ 1.5
PPM1F-208ENST00000496143 KIAA0355O15063 1070 aa24.4■■□□□ 1.5
PPM1F-208ENST00000496143 RAG1P15918 1043 aa24.4■■□□□ 1.5
PPM1F-208ENST00000496143 ARHGAP1Q07960 439 aa24.4■■□□□ 1.5
PPM1F-208ENST00000496143 FAAP100Q0VG06 881 aa24.4■■□□□ 1.5
PPM1F-208ENST00000496143 PCNX4Q63HM2 1172 aa24.4■■□□□ 1.5
PPM1F-208ENST00000496143 SLC43A3Q8NBI5 491 aa24.4■■□□□ 1.5
PPM1F-208ENST00000496143 EMID1Q96A84 441 aaPredicted RBP24.4■■□□□ 1.5
PPM1F-208ENST00000496143 BARHL2Q9NY43 387 aa24.4■■□□□ 1.5
PPM1F-208ENST00000496143 KIAA1217Q5T5P2 1943 aa24.39■■□□□ 1.5
PPM1F-208ENST00000496143 TRIM43BA6NCK2 446 aa24.39■■□□□ 1.49
PPM1F-208ENST00000496143 RGS20O76081 388 aa24.39■■□□□ 1.49
PPM1F-208ENST00000496143 PDIA3P30101 505 aaKnown RBP24.39■■□□□ 1.49
PPM1F-208ENST00000496143 ADCY7P51828 1080 aa24.39■■□□□ 1.49
PPM1F-208ENST00000496143 TOB2Q14106 344 aaPredicted RBP24.39■■□□□ 1.49
PPM1F-208ENST00000496143 PFKFB3Q16875 520 aaPredicted RBP24.39■■□□□ 1.49
PPM1F-208ENST00000496143 SH3RF1Q7Z6J0 888 aa24.39■■□□□ 1.49
PPM1F-208ENST00000496143 FAM126BQ8IXS8 530 aa24.39■■□□□ 1.49
PPM1F-208ENST00000496143 CCDC12Q8WUD4 166 aaPredicted RBP24.39■■□□□ 1.49
PPM1F-208ENST00000496143 AFG1LQ8WV93 481 aa24.39■■□□□ 1.49
PPM1F-208ENST00000496143 TRIM43Q96BQ3 446 aaPredicted RBP24.39■■□□□ 1.49
PPM1F-208ENST00000496143 RIC8AQ9NPQ8 531 aa24.39■■□□□ 1.49
PPM1F-208ENST00000496143 MMP3P08254 477 aa24.38■■□□□ 1.49
PPM1F-208ENST00000496143 SCG2P13521 617 aa24.38■■□□□ 1.49
PPM1F-208ENST00000496143 PSMC6P62333 389 aa24.38■■□□□ 1.49
PPM1F-208ENST00000496143 DGKDQ16760 1214 aa24.38■■□□□ 1.49
PPM1F-208ENST00000496143 UBE2SQ16763 222 aa24.38■■□□□ 1.49
PPM1F-208ENST00000496143 NLRX1Q86UT6 975 aa24.38■■□□□ 1.49
PPM1F-208ENST00000496143 TDHQ8IZJ6 230 aa24.38■■□□□ 1.49
PPM1F-208ENST00000496143 ZNF274Q96GC6 653 aaPredicted RBP24.38■■□□□ 1.49
PPM1F-208ENST00000496143 INPP4AQ96PE3 977 aaPredicted RBP24.38■■□□□ 1.49
PPM1F-208ENST00000496143 STXBP3O00186 592 aa24.37■■□□□ 1.49
PPM1F-208ENST00000496143 PRPF3O43395 683 aaKnown RBP24.37■■□□□ 1.49
PPM1F-208ENST00000496143 FIBPO43427 364 aa24.37■■□□□ 1.49
PPM1F-208ENST00000496143 FOSP01100 380 aaPredicted RBP24.37■■□□□ 1.49
PPM1F-208ENST00000496143 MRPS9P82933 396 aaKnown RBP24.37■■□□□ 1.49
PPM1F-208ENST00000496143 PPTC7Q8NI37 304 aa24.37■■□□□ 1.49
PPM1F-208ENST00000496143 BADQ92934 168 aa24.37■■□□□ 1.49
PPM1F-208ENST00000496143 RNF26Q9BY78 433 aaPredicted RBP24.37■■□□□ 1.49
PPM1F-208ENST00000496143 PCDHA6Q9UN73 950 aa24.37■■□□□ 1.49
PPM1F-208ENST00000496143 PCDHA8Q9Y5H6 950 aa24.37■■□□□ 1.49
PPM1F-208ENST00000496143 SMCO2A6NFE2 343 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 CPLX1O14810 134 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 GGPS1O95749 300 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 IFNAR1P17181 557 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 UBA1P22314 1058 aaKnown RBP24.36■■□□□ 1.49
PPM1F-208ENST00000496143 ICAM3P32942 547 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 NEDD9Q14511 834 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 CELF3Q5SZQ8 465 aaKnown RBP24.36■■□□□ 1.49
PPM1F-208ENST00000496143 CPLX2Q6PUV4 134 aaKnown RBP24.36■■□□□ 1.49
PPM1F-208ENST00000496143 MLXIPQ9HAP2 919 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 RTEL1Q9NZ71 1219 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 TBX21Q9UL17 535 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms