RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 RNF208Q9H0X6 261 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 UNC93B1Q9H1C4 597 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 FAM184BQ9ULE4 1060 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 PLXNA1Q9UIW2 1896 aa16.84■□□□□ 0.29
HDAC9-226ENST00000496026 BTBD18B2RXH4 712 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 M0R2N6 131 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 STAM2O75886 525 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 PDCP20941 246 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 ZNF76P36508 570 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 ARHGAP4P98171 946 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 NR5A1Q13285 461 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 NONOQ15233 471 aaKnown RBP eCLIP16.83■□□□□ 0.28
HDAC9-226ENST00000496026 CCDC144BQ3MJ40 725 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 SEPT14Q6ZU15 432 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 KATNBL1Q9H079 304 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 PDGFCQ9NRA1 345 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 RTEL1Q9NZ71 1219 aa16.83■□□□□ 0.28
HDAC9-226ENST00000496026 LCTP09848 1927 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 SEPT4O43236 478 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 AKR1A1P14550 325 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 ANP32AP39687 249 aaKnown RBP16.82■□□□□ 0.28
HDAC9-226ENST00000496026 MRPS9P82933 396 aaKnown RBP16.82■□□□□ 0.28
HDAC9-226ENST00000496026 TAPT1Q6NXT6 567 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 PIK3AP1Q6ZUJ8 805 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 TBCKQ8TEA7 893 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 SCFD2Q8WU76 684 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 ABHD8Q96I13 439 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 TMEM106CQ9BVX2 250 aa16.82■□□□□ 0.28
HDAC9-226ENST00000496026 MSCO60682 206 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 ADCYAP1R1P41586 468 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 TNFAIP2Q03169 654 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 GNPTABQ3T906 1256 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 IQSEC1Q6DN90 963 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 NLRX1Q86UT6 975 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 WDR11Q9BZH6 1224 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 FOXP1Q9H334 677 aaPredicted RBP16.81■□□□□ 0.28
HDAC9-226ENST00000496026 DDX20Q9UHI6 824 aaKnown RBP16.81■□□□□ 0.28
HDAC9-226ENST00000496026 MRVI1Q9Y6F6 885 aa16.81■□□□□ 0.28
HDAC9-226ENST00000496026 VPS37CA5D8V6 355 aaPredicted RBP16.8■□□□□ 0.28
HDAC9-226ENST00000496026 CYP3A4P08684 503 aa16.8■□□□□ 0.28
HDAC9-226ENST00000496026 TTLL4Q14679 1199 aa16.8■□□□□ 0.28
HDAC9-226ENST00000496026 INF2Q27J81 1249 aa16.8■□□□□ 0.28
HDAC9-226ENST00000496026 ANO1Q5XXA6 986 aa16.8■□□□□ 0.28
HDAC9-226ENST00000496026 TNFRSF25Q93038 417 aa16.8■□□□□ 0.28
HDAC9-226ENST00000496026 INPP4AQ96PE3 977 aaPredicted RBP16.8■□□□□ 0.28
HDAC9-226ENST00000496026 DEFB118Q96PH6 123 aa16.8■□□□□ 0.28
HDAC9-226ENST00000496026 PAK6Q9NQU5 681 aaPredicted RBP16.8■□□□□ 0.28
HDAC9-226ENST00000496026 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.79■□□□□ 0.28
HDAC9-226ENST00000496026 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
HDAC9-226ENST00000496026 FIBPO43427 364 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 TXNP10599 105 aaKnown RBP16.79■□□□□ 0.28
HDAC9-226ENST00000496026 RARBP10826 455 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 USP11P51784 963 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 MTMR1Q13613 665 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 CEP55Q53EZ4 464 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
HDAC9-226ENST00000496026 GPRASP2Q96D09 838 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 MXRA8Q9BRK3 442 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 UBIAD1Q9Y5Z9 338 aa16.79■□□□□ 0.28
HDAC9-226ENST00000496026 FAM205CA6NFA0 338 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 RGS20O76081 388 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 GJB1P08034 283 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 SMPD1P17405 629 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 ITGB5P18084 799 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 SYT1P21579 422 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 LY6KQ17RY6 165 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 LETM2Q2VYF4 491 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 EARS2Q5JPH6 523 aaKnown RBP16.78■□□□□ 0.28
HDAC9-226ENST00000496026 NEK8Q86SG6 692 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 CRYGNQ8WXF5 182 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 CDHR1Q96JP9 859 aa16.78■□□□□ 0.28
HDAC9-226ENST00000496026 DAXXQ9UER7 740 aaPredicted RBP16.78■□□□□ 0.28
HDAC9-226ENST00000496026 CCDC85CA6NKD9 419 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 SPATA31C2B4DYI2 1134 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 KIF28PB7ZC32 967 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 FAM86B1E9PN63 330 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 NKRFO15226 690 aaKnown RBP eCLIP16.77■□□□□ 0.28
HDAC9-226ENST00000496026 ADCY6O43306 1168 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 DUSP11O75319 330 aaKnown RBP16.77■□□□□ 0.28
HDAC9-226ENST00000496026 ARIH2O95376 493 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.28
HDAC9-226ENST00000496026 FAM86B2P0C5J1 330 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 TGFB3P10600 412 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 U2AF2P26368 475 aaKnown RBP eCLIP16.77■□□□□ 0.28
HDAC9-226ENST00000496026 ICAM3P32942 547 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 CIITAP33076 1130 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 DUSP28Q4G0W2 176 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 LHX8Q68G74 356 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 CCDC62Q6P9F0 684 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 NIPA1Q7RTP0 329 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 PLA2G4DQ86XP0 818 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 CYP2W1Q8TAV3 490 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 NAP1L4Q99733 375 aaKnown RBP16.77■□□□□ 0.28
HDAC9-226ENST00000496026 AP5M1Q9H0R1 490 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 XPNPEP3Q9NQH7 507 aa16.77■□□□□ 0.28
HDAC9-226ENST00000496026 LRRC37A2A6NM11 1700 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms