RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 RAD9AQ99638 391 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 EPHX3Q9H6B9 360 aa20.55■□□□□ 0.88
TMEM53-209ENST00000495630 ABCB11O95342 1321 aa20.54■□□□□ 0.88
TMEM53-209ENST00000495630 EFCAB14O75071 495 aa20.54■□□□□ 0.88
TMEM53-209ENST00000495630 ZNF589Q86UQ0 364 aaPredicted RBP20.54■□□□□ 0.88
TMEM53-209ENST00000495630 GTF2IRD1Q9UHL9 959 aa20.54■□□□□ 0.88
TMEM53-209ENST00000495630 EIF3JO75822 258 aaKnown RBP20.53■□□□□ 0.88
TMEM53-209ENST00000495630 CKBP12277 381 aa20.53■□□□□ 0.88
TMEM53-209ENST00000495630 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
TMEM53-209ENST00000495630 NMIQ13287 307 aaPredicted RBP20.53■□□□□ 0.88
TMEM53-209ENST00000495630 CHST3Q7LGC8 479 aa20.53■□□□□ 0.88
TMEM53-209ENST00000495630 C7orf31Q8N865 590 aa20.53■□□□□ 0.88
TMEM53-209ENST00000495630 DHX38Q92620 1227 aaKnown RBP20.53■□□□□ 0.88
TMEM53-209ENST00000495630 EMID1Q96A84 441 aaPredicted RBP20.53■□□□□ 0.88
TMEM53-209ENST00000495630 RMDN3Q96TC7 470 aa20.53■□□□□ 0.88
TMEM53-209ENST00000495630 LRFN3Q9BTN0 628 aa20.53■□□□□ 0.88
TMEM53-209ENST00000495630 HDAC6Q9UBN7 1215 aa20.53■□□□□ 0.88
TMEM53-209ENST00000495630 DDX41Q9UJV9 622 aaKnown RBP20.53■□□□□ 0.88
TMEM53-209ENST00000495630 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
TMEM53-209ENST00000495630 LCHNA4D1U4 455 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 NBNO60934 754 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 GJB5O95377 273 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 ERVK-21P61565 698 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 LAMC2Q13753 1193 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 IKBKEQ14164 716 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 CDC37Q16543 378 aaPredicted RBP20.52■□□□□ 0.88
TMEM53-209ENST00000495630 SPRED2Q7Z698 418 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 IQCA1Q86XH1 822 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 TBC1D10CQ8IV04 446 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 ADGRF4Q8IZF3 695 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 PNMA1Q8ND90 353 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 TET1Q8NFU7 2136 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 ANKS1AQ92625 1134 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 ZKSCAN3Q9BRR0 538 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 KATNAL1Q9BW62 490 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 CPVLQ9H3G5 476 aa20.52■□□□□ 0.88
TMEM53-209ENST00000495630 MRPL11Q9Y3B7 192 aaKnown RBP20.52■□□□□ 0.88
TMEM53-209ENST00000495630 ZNF213O14771 459 aa20.51■□□□□ 0.87
TMEM53-209ENST00000495630 PSEN2P49810 448 aa20.51■□□□□ 0.87
TMEM53-209ENST00000495630 DEFB103AP81534 67 aa20.51■□□□□ 0.87
TMEM53-209ENST00000495630 PTK7Q13308 1070 aa20.51■□□□□ 0.87
TMEM53-209ENST00000495630 TMEM31Q5JXX7 168 aa20.51■□□□□ 0.87
TMEM53-209ENST00000495630 ARHGEF16Q5VV41 709 aa20.51■□□□□ 0.87
TMEM53-209ENST00000495630 TGS1Q96RS0 853 aaKnown RBP20.51■□□□□ 0.87
TMEM53-209ENST00000495630 SUGCTQ9HAC7 445 aa20.51■□□□□ 0.87
TMEM53-209ENST00000495630 COL20A1Q9P218 1284 aa20.51■□□□□ 0.87
TMEM53-209ENST00000495630 HAS3O00219 553 aa20.5■□□□□ 0.87
TMEM53-209ENST00000495630 ASPRV1Q53RT3 343 aa20.5■□□□□ 0.87
TMEM53-209ENST00000495630 TMCO2Q7Z6W1 182 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-209ENST00000495630 FBXO11Q86XK2 927 aa20.5■□□□□ 0.87
TMEM53-209ENST00000495630 PPTC7Q8NI37 304 aa20.5■□□□□ 0.87
TMEM53-209ENST00000495630 KAT14Q9H8E8 782 aa20.5■□□□□ 0.87
TMEM53-209ENST00000495630 GPR37L1O60883 481 aa20.49■□□□□ 0.87
TMEM53-209ENST00000495630 PPFIA4O75335 1185 aa20.49■□□□□ 0.87
TMEM53-209ENST00000495630 NR3C2P08235 984 aa20.49■□□□□ 0.87
TMEM53-209ENST00000495630 HDAC1Q13547 482 aaPredicted RBP20.49■□□□□ 0.87
TMEM53-209ENST00000495630 MFSD10Q14728 455 aa20.49■□□□□ 0.87
TMEM53-209ENST00000495630 TRIM71Q2Q1W2 868 aaKnown RBP20.49■□□□□ 0.87
TMEM53-209ENST00000495630 QRICH1Q2TAL8 776 aa20.49■□□□□ 0.87
TMEM53-209ENST00000495630 DHX37Q8IY37 1157 aaKnown RBP20.49■□□□□ 0.87
TMEM53-209ENST00000495630 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
TMEM53-209ENST00000495630 HCN4Q9Y3Q4 1203 aa20.49■□□□□ 0.87
TMEM53-209ENST00000495630 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.48■□□□□ 0.87
TMEM53-209ENST00000495630 TRIM6-TRIM34B2RNG4 842 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 F2P00734 622 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 KIAA0753Q2KHM9 967 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 TCTN1Q2MV58 587 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 GDPD5Q8WTR4 605 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 RILPL2Q969X0 211 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 VAT1LQ9HCJ6 419 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 PXMP2Q9NR77 195 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 MAP3K20Q9NYL2 800 aaKnown RBP20.48■□□□□ 0.87
TMEM53-209ENST00000495630 INSL6Q9Y581 213 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 MRVI1Q9Y6F6 885 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 TRIP12Q14669 1992 aaPredicted RBP20.48■□□□□ 0.87
TMEM53-209ENST00000495630 NEDD4P46934 1319 aa20.48■□□□□ 0.87
TMEM53-209ENST00000495630 LINC01553A4QN01 128 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 PI4K2BG5E9Z4 385 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 KDM4AO75164 1064 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 HOXD8P13378 290 aaPredicted RBP20.47■□□□□ 0.87
TMEM53-209ENST00000495630 EIF2AK2P19525 551 aaKnown RBP20.47■□□□□ 0.87
TMEM53-209ENST00000495630 SDSP20132 328 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 HOXD11P31277 338 aaPredicted RBP20.47■□□□□ 0.87
TMEM53-209ENST00000495630 ZNF618Q5T7W0 954 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 KCNV1Q6PIU1 500 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 TRAF7Q6Q0C0 670 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 CRBNQ96SW2 442 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 ZSCAN10Q96SZ4 725 aaPredicted RBP20.47■□□□□ 0.87
TMEM53-209ENST00000495630 JMJD4Q9H9V9 463 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 ZSWIM5Q9P217 1185 aa20.47■□□□□ 0.87
TMEM53-209ENST00000495630 DHX16O60231 1041 aaKnown RBP20.46■□□□□ 0.87
TMEM53-209ENST00000495630 LGR5O75473 907 aa20.46■□□□□ 0.87
TMEM53-209ENST00000495630 PARP1P09874 1014 aaKnown RBP20.46■□□□□ 0.87
TMEM53-209ENST00000495630 SAMD3Q8N6K7 520 aa20.46■□□□□ 0.87
TMEM53-209ENST00000495630 TANC1Q9C0D5 1861 aa20.45■□□□□ 0.86
TMEM53-209ENST00000495630 CFBP00751 764 aa20.45■□□□□ 0.86
TMEM53-209ENST00000495630 TGFB3P10600 412 aa20.45■□□□□ 0.86
TMEM53-209ENST00000495630 HSD17B4P51659 736 aa20.45■□□□□ 0.86
TMEM53-209ENST00000495630 GHRHRQ02643 423 aa20.45■□□□□ 0.86
TMEM53-209ENST00000495630 LEXMQ3ZCV2 418 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms