RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 ZNF143P52747 638 aaPredicted RBP7.11□□□□□ -1.27
SRRM1-219ENST00000495561 KIAA2012Q0VF49 1180 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 PRR31Q5SQ13 230 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 C9orf131Q5VYM1 1079 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 ZC3H18Q86VM9 953 aaKnown RBP7.11□□□□□ -1.27
SRRM1-219ENST00000495561 NT5DC4Q86YG4 428 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 LGI4Q8N135 537 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 TTC9BQ8N6N2 239 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 NPLOC4Q8TAT6 608 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 LOXL4Q96JB6 756 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 MRGPRX3Q96LB0 322 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 C8orf49Q96NF6 230 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 NKX2-4Q9H2Z4 354 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 CYP26B1Q9NR63 512 aa7.11□□□□□ -1.27
SRRM1-219ENST00000495561 MROH6A6NGR9 719 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 NOP56O00567 594 aaKnown RBP7.1□□□□□ -1.27
SRRM1-219ENST00000495561 MATN3O15232 486 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 NAT2P11245 290 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 ZNF20P17024 532 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 FPR2P25090 351 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 HDLBPQ00341 1268 aaKnown RBP7.1□□□□□ -1.27
SRRM1-219ENST00000495561 CPZQ66K79 652 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 MCTP2Q6DN12 878 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 MILR1Q7Z6M3 343 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 FAM126BQ8IXS8 530 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 TXNDC5Q8NBS9 432 aaKnown RBP7.1□□□□□ -1.27
SRRM1-219ENST00000495561 C1QTNF3Q9BXJ4 246 aa7.1□□□□□ -1.27
SRRM1-219ENST00000495561 C1QTNF3-AMACRE9PGA6 284 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 DDX3XO00571 662 aaKnown RBP eCLIP7.09□□□□□ -1.27
SRRM1-219ENST00000495561 STAT5AP42229 794 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 RPL11P62913 178 aaKnown RBP7.09□□□□□ -1.27
SRRM1-219ENST00000495561 MROH9Q5TGP6 573 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 BORAQ6PGQ7 559 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 FAM124AQ86V42 546 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 RIOX2Q8IUF8 465 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 Q8N1Y9 231 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 PPP1R14AQ96A00 147 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 SEC16BQ96JE7 1060 aa7.09□□□□□ -1.27
SRRM1-219ENST00000495561 SSBP3Q9BWW4 388 aaPredicted RBP7.09□□□□□ -1.27
SRRM1-219ENST00000495561 MFAP1P55081 439 aaKnown RBP7.08□□□□□ -1.28
SRRM1-219ENST00000495561 ZXDAP98168 799 aa7.08□□□□□ -1.28
SRRM1-219ENST00000495561 NCAPHQ15003 741 aa7.08□□□□□ -1.28
SRRM1-219ENST00000495561 IQCEQ6IPM2 695 aa7.08□□□□□ -1.28
SRRM1-219ENST00000495561 NLRP10Q86W26 655 aa7.08□□□□□ -1.28
SRRM1-219ENST00000495561 CCDC103Q8IW40 242 aa7.08□□□□□ -1.28
SRRM1-219ENST00000495561 TIMM13Q9Y5L4 95 aaPredicted RBP7.08□□□□□ -1.28
SRRM1-219ENST00000495561 X6R8D5 127 aa7.08□□□□□ -1.28
SRRM1-219ENST00000495561 ARNTLO00327 626 aa7.07□□□□□ -1.28
SRRM1-219ENST00000495561 AKAP8O43823 692 aaKnown RBP7.07□□□□□ -1.28
SRRM1-219ENST00000495561 ADAM9Q13443 819 aa7.07□□□□□ -1.28
SRRM1-219ENST00000495561 CR1LQ2VPA4 569 aa7.07□□□□□ -1.28
SRRM1-219ENST00000495561 CEP68Q76N32 757 aa7.07□□□□□ -1.28
SRRM1-219ENST00000495561 BTN2A2Q8WVV5 523 aa7.07□□□□□ -1.28
SRRM1-219ENST00000495561 ANAPC16Q96DE5 110 aa7.07□□□□□ -1.28
SRRM1-219ENST00000495561 TMEFF2Q9UIK5 374 aaPredicted RBP7.07□□□□□ -1.28
SRRM1-219ENST00000495561 ZNF536O15090 1300 aa7.06□□□□□ -1.28
SRRM1-219ENST00000495561 TBX1O43435 398 aa7.06□□□□□ -1.28
SRRM1-219ENST00000495561 BCL6P41182 706 aa7.06□□□□□ -1.28
SRRM1-219ENST00000495561 E4F1Q66K89 784 aaPredicted RBP7.06□□□□□ -1.28
SRRM1-219ENST00000495561 DIO2Q92813 273 aa7.06□□□□□ -1.28
SRRM1-219ENST00000495561 TRMT2BQ96GJ1 504 aaKnown RBP7.06□□□□□ -1.28
SRRM1-219ENST00000495561 LCORQ96JN0 433 aaPredicted RBP7.06□□□□□ -1.28
SRRM1-219ENST00000495561 NGRNQ9NPE2 291 aaKnown RBP7.06□□□□□ -1.28
SRRM1-219ENST00000495561 FBXL7Q9UJT9 491 aa7.06□□□□□ -1.28
SRRM1-219ENST00000495561 STRIP2Q9ULQ0 834 aa7.06□□□□□ -1.28
SRRM1-219ENST00000495561 ZNF28P17035 718 aa7.05□□□□□ -1.28
SRRM1-219ENST00000495561 LIMS2Q7Z4I7 341 aa7.05□□□□□ -1.28
SRRM1-219ENST00000495561 CHST13Q8NET6 341 aa7.05□□□□□ -1.28
SRRM1-219ENST00000495561 ST6GALNAC2Q9UJ37 374 aa7.05□□□□□ -1.28
SRRM1-219ENST00000495561 C9orf118A6NHY6 69 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 B4GALT3O60512 393 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 GTF2A2P52657 109 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 NKX3-2P78367 333 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 KCNAB2Q13303 367 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 PRAMEF18Q5VWM3 479 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 GLB1LQ6UWU2 654 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 KREMEN2Q8NCW0 462 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 DVL3Q92997 716 aaPredicted RBP7.04□□□□□ -1.28
SRRM1-219ENST00000495561 TMEM169Q96HH4 297 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 YIPF4Q9BSR8 244 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 ZNF652Q9Y2D9 606 aa7.04□□□□□ -1.28
SRRM1-219ENST00000495561 MEFVO15553 781 aaPredicted RBP7.03□□□□□ -1.28
SRRM1-219ENST00000495561 MYO1BO43795 1136 aa7.03□□□□□ -1.28
SRRM1-219ENST00000495561 SCG5P05408 212 aa7.03□□□□□ -1.28
SRRM1-219ENST00000495561 ITGAVP06756 1048 aa7.03□□□□□ -1.28
SRRM1-219ENST00000495561 SNRPB2P08579 225 aaKnown RBP7.03□□□□□ -1.28
SRRM1-219ENST00000495561 HOXC12P31275 282 aa7.03□□□□□ -1.28
SRRM1-219ENST00000495561 ECI1P42126 302 aa7.03□□□□□ -1.28
SRRM1-219ENST00000495561 ZNF227Q86WZ6 799 aa7.03□□□□□ -1.28
SRRM1-219ENST00000495561 ACBD3Q9H3P7 528 aa7.03□□□□□ -1.28
SRRM1-219ENST00000495561 COA3Q9Y2R0 106 aaPredicted RBP7.03□□□□□ -1.28
SRRM1-219ENST00000495561 ZBTB7CA1YPR0 619 aa7.02□□□□□ -1.29
SRRM1-219ENST00000495561 LAMTOR5O43504 91 aa7.02□□□□□ -1.29
SRRM1-219ENST00000495561 ACBD5Q5T8D3 534 aaPredicted RBP7.02□□□□□ -1.29
SRRM1-219ENST00000495561 C6orf15Q6UXA7 325 aaPredicted RBP7.02□□□□□ -1.29
SRRM1-219ENST00000495561 ARRDC4Q8NCT1 418 aa7.02□□□□□ -1.29
SRRM1-219ENST00000495561 RCBTB1Q8NDN9 531 aa7.02□□□□□ -1.29
SRRM1-219ENST00000495561 MBD6Q96DN6 1003 aa7.02□□□□□ -1.29
SRRM1-219ENST00000495561 TOE1Q96GM8 510 aaKnown RBP7.02□□□□□ -1.29
SRRM1-219ENST00000495561 ZSWIM3Q96MP5 696 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms