RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SOX10P56693 466 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 BECN1Q14457 450 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 CCDC144BQ3MJ40 725 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 IQSEC1Q6DN90 963 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 KRT25Q7Z3Z0 450 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 FBXO18Q8NFZ0 1043 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 SCFD2Q8WU76 684 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 KATNBL1Q9H079 304 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 GJB4Q9NTQ9 266 aa19.53■□□□□ 0.72
HDAC6-235ENST00000495515 DDX49Q9Y6V7 483 aaKnown RBP19.53■□□□□ 0.72
HDAC6-235ENST00000495515 RARBP10826 455 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 PDCP20941 246 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 TTLL4Q14679 1199 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 NPY5RQ15761 445 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 KCNV1Q6PIU1 500 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 NLRX1Q86UT6 975 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 IL31RAQ8NI17 732 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 RASGRP4Q8TDF6 673 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 PGBD1Q96JS3 809 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 DEFB118Q96PH6 123 aa19.52■□□□□ 0.72
HDAC6-235ENST00000495515 RBM47A0AV96 593 aaKnown RBP19.51■□□□□ 0.71
HDAC6-235ENST00000495515 H3BQV1 296 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 M0R2N6 131 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 ZNF76P36508 570 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 ARHGAP4P98171 946 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 TNFAIP2Q03169 654 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
HDAC6-235ENST00000495515 NONOQ15233 471 aaKnown RBP eCLIP19.51■□□□□ 0.71
HDAC6-235ENST00000495515 TAPT1Q6NXT6 567 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 SEPT14Q6ZU15 432 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 DIS3L2Q8IYB7 885 aaKnown RBP19.51■□□□□ 0.71
HDAC6-235ENST00000495515 CDHR1Q96JP9 859 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 WDR11Q9BZH6 1224 aa19.51■□□□□ 0.71
HDAC6-235ENST00000495515 NKRFO15226 690 aaKnown RBP eCLIP19.5■□□□□ 0.71
HDAC6-235ENST00000495515 CYP3A4P08684 503 aa19.5■□□□□ 0.71
HDAC6-235ENST00000495515 ADCYAP1R1P41586 468 aa19.5■□□□□ 0.71
HDAC6-235ENST00000495515 MRPS9P82933 396 aaKnown RBP19.5■□□□□ 0.71
HDAC6-235ENST00000495515 GUCY1B3Q02153 619 aa19.5■□□□□ 0.71
HDAC6-235ENST00000495515 LARP1BQ659C4 914 aaKnown RBP19.5■□□□□ 0.71
HDAC6-235ENST00000495515 INPP4AQ96PE3 977 aaPredicted RBP19.5■□□□□ 0.71
HDAC6-235ENST00000495515 SPC25Q9HBM1 224 aa19.5■□□□□ 0.71
HDAC6-235ENST00000495515 MRVI1Q9Y6F6 885 aa19.5■□□□□ 0.71
HDAC6-235ENST00000495515 LCTP09848 1927 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 MAFGO15525 162 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 DUSP11O75319 330 aaKnown RBP19.49■□□□□ 0.71
HDAC6-235ENST00000495515 SGPL1O95470 568 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 TXNP10599 105 aaKnown RBP19.49■□□□□ 0.71
HDAC6-235ENST00000495515 TGFB3P10600 412 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 USP11P51784 963 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 DUSP28Q4G0W2 176 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 U2AF1L4Q8WU68 220 aaKnown RBP19.49■□□□□ 0.71
HDAC6-235ENST00000495515 GPRASP2Q96D09 838 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 PDGFCQ9NRA1 345 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 RTEL1Q9NZ71 1219 aa19.49■□□□□ 0.71
HDAC6-235ENST00000495515 BTBD18B2RXH4 712 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 ADAMTS3O15072 1205 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 FIBPO43427 364 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 TFRCP02786 760 aaKnown RBP19.48■□□□□ 0.71
HDAC6-235ENST00000495515 GJA8P48165 433 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 CEP55Q53EZ4 464 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 LHX8Q68G74 356 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 OXER1Q8TDS5 423 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 TBCKQ8TEA7 893 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 NAP1L4Q99733 375 aaKnown RBP19.48■□□□□ 0.71
HDAC6-235ENST00000495515 AP5M1Q9H0R1 490 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 FOXP1Q9H334 677 aaPredicted RBP19.48■□□□□ 0.71
HDAC6-235ENST00000495515 XPNPEP3Q9NQH7 507 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 Q9Y3F1 56 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 UBIAD1Q9Y5Z9 338 aa19.48■□□□□ 0.71
HDAC6-235ENST00000495515 SMPD1P17405 629 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 ICAM3P32942 547 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 NR5A1Q13285 461 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 MTMR1Q13613 665 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 PIK3AP1Q6ZUJ8 805 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 ARRDC4Q8NCT1 418 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 CRYGNQ8WXF5 182 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 ZFP91Q96JP5 570 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-235ENST00000495515 MXRA8Q9BRK3 442 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 JADE2Q9NQC1 790 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 FOXD4L1Q9NU39 408 aa19.47■□□□□ 0.71
HDAC6-235ENST00000495515 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-235ENST00000495515 RGS20O76081 388 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 PDIA4P13667 645 aaKnown RBP19.46■□□□□ 0.71
HDAC6-235ENST00000495515 ITGB5P18084 799 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 CIITAP33076 1130 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 INF2Q27J81 1249 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 ANO1Q5XXA6 986 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 CCDC62Q6P9F0 684 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 NIPA1Q7RTP0 329 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 RNF180Q86T96 592 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 GIMAP8Q8ND71 665 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-235ENST00000495515 CRISPLD2Q9H0B8 497 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
HDAC6-235ENST00000495515 OGDHLQ9ULD0 1010 aa19.46■□□□□ 0.71
HDAC6-235ENST00000495515 GNEQ9Y223 722 aaKnown RBP19.46■□□□□ 0.71
HDAC6-235ENST00000495515 SPATA31C2B4DYI2 1134 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 GH1P01241 217 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 SETQ01105 290 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-235ENST00000495515 NEDD9Q14511 834 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 BRDTQ58F21 947 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms