RNA–Protein interactions for RNA: ENST00000495175.6

TRIT1-213, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best)

Gene TRIT1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-213ENST00000495175 PDGFCQ9NRA1 345 aa12.75□□□□□ -0.37
TRIT1-213ENST00000495175 TSHZ2Q9NRE2 1034 aa12.75□□□□□ -0.37
TRIT1-213ENST00000495175 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
TRIT1-213ENST00000495175 IGLV3-22A0A075B6J6 115 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 BTBD18B2RXH4 712 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 ARIH2O95376 493 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 ITGB5P18084 799 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 ACVR2BQ13705 512 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 MFSD14CQ5VZR4 134 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 LHX8Q68G74 356 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 CCDC62Q6P9F0 684 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 DIS3L2Q8IYB7 885 aaKnown RBP12.74□□□□□ -0.37
TRIT1-213ENST00000495175 LENG9Q96B70 501 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
TRIT1-213ENST00000495175 UNC93B1Q9H1C4 597 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 UBIAD1Q9Y5Z9 338 aa12.74□□□□□ -0.37
TRIT1-213ENST00000495175 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.73□□□□□ -0.37
TRIT1-213ENST00000495175 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 WNT7AO00755 349 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 EIF3JO75822 258 aaKnown RBP12.73□□□□□ -0.37
TRIT1-213ENST00000495175 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 CCL5P13501 91 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 XBP1P17861 261 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 PTGS1P23219 599 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 U2AF2P26368 475 aaKnown RBP eCLIP12.73□□□□□ -0.374e-6■■■□□ 17.7
TRIT1-213ENST00000495175 CCND2P30279 289 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 CIITAP33076 1130 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 KRT2P35908 639 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 STXBP2Q15833 593 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 MCTP2Q6DN12 878 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 XRRA1Q6P2D8 792 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 FAM184AQ8NB25 1140 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 CYP2W1Q8TAV3 490 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 MBOAT7Q96N66 472 aa12.73□□□□□ -0.37
TRIT1-213ENST00000495175 FAM86B1E9PN63 330 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 CTAGE5O15320 804 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 SEPT4O43236 478 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 FAM86B2P0C5J1 330 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 SYT1P21579 422 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 ICAM3P32942 547 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 DDIT3P35638 169 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 ADCYAP1R1P41586 468 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 NKX3-2P78367 333 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 PDE4DQ08499 809 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 CCDC144BQ3MJ40 725 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 EEPD1Q7L9B9 569 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 KRT25Q7Z3Z0 450 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 LENG1Q96BZ8 264 aaPredicted RBP12.72□□□□□ -0.37
TRIT1-213ENST00000495175 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRIT1-213ENST00000495175 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
TRIT1-213ENST00000495175 MTMR6Q9Y217 621 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 GNEQ9Y223 722 aaKnown RBP12.72□□□□□ -0.37
TRIT1-213ENST00000495175 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 DOCK5Q9H7D0 1870 aa12.72□□□□□ -0.37
TRIT1-213ENST00000495175 KIAA0100Q14667 2235 aaKnown RBP12.72□□□□□ -0.37
TRIT1-213ENST00000495175 CYP3A7-CYP3A51PA0A087WV96 503 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 SPATA31C2B4DYI2 1134 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 MEIS1O00470 390 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 STAM2O75886 525 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 MYCLP12524 364 aaPredicted RBP12.71□□□□□ -0.37
TRIT1-213ENST00000495175 SMPD1P17405 629 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 CYP3A7P24462 503 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
TRIT1-213ENST00000495175 SP2Q02086 613 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 INF2Q27J81 1249 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 BCAS3Q9H6U6 928 aa12.71□□□□□ -0.37
TRIT1-213ENST00000495175 HMX1Q9NP08 348 aaPredicted RBP12.71□□□□□ -0.37
TRIT1-213ENST00000495175 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
TRIT1-213ENST00000495175 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 AKR1A1P14550 325 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 TOB1P50616 345 aaPredicted RBP12.7□□□□□ -0.38
TRIT1-213ENST00000495175 USP11P51784 963 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 TRIM29Q14134 588 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 NONOQ15233 471 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIT1-213ENST00000495175 CEP55Q53EZ4 464 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 GJC2Q5T442 439 aaPredicted RBP12.7□□□□□ -0.38
TRIT1-213ENST00000495175 LARP1BQ659C4 914 aaKnown RBP12.7□□□□□ -0.38
TRIT1-213ENST00000495175 MOXD1Q6UVY6 613 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 PIK3AP1Q6ZUJ8 805 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 NIPA1Q7RTP0 329 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 NOSTRINQ8IVI9 506 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 GPRASP2Q96D09 838 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 ABHD8Q96I13 439 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 MPHOSPH6Q99547 160 aaKnown RBP12.7□□□□□ -0.38
TRIT1-213ENST00000495175 MXRA8Q9BRK3 442 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 WDR11Q9BZH6 1224 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 UPF3AQ9H1J1 476 aaKnown RBP12.7□□□□□ -0.38
TRIT1-213ENST00000495175 JADE2Q9NQC1 790 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 DDX20Q9UHI6 824 aaKnown RBP12.7□□□□□ -0.38
TRIT1-213ENST00000495175 DDX41Q9UJV9 622 aaKnown RBP12.7□□□□□ -0.38
TRIT1-213ENST00000495175 KIF3AQ9Y496 699 aa12.7□□□□□ -0.38
TRIT1-213ENST00000495175 MKI67P46013 3256 aaKnown RBP12.69□□□□□ -0.38
TRIT1-213ENST00000495175 MYH15Q9Y2K3 1946 aa12.69□□□□□ -0.38
TRIT1-213ENST00000495175 B4DLN1 442 aa12.69□□□□□ -0.38
TRIT1-213ENST00000495175 ATP9AO75110 1047 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms