RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SYMPKQ92797 1274 aaKnown RBP18.38■□□□□ 0.53
CBX4-204ENST00000495122 SMARCE1Q969G3 411 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 P2RX7Q99572 595 aaKnown RBP18.38■□□□□ 0.53
CBX4-204ENST00000495122 TRIM5Q9C035 493 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 JMJD4Q9H9V9 463 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 MAGEF1Q9HAY2 307 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 RIC8AQ9NPQ8 531 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 PCDH10Q9P2E7 1040 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 EEF2P13639 858 aaKnown RBP18.37■□□□□ 0.53
CBX4-204ENST00000495122 MCM7P33993 719 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 MRPL12P52815 198 aaKnown RBP18.37■□□□□ 0.53
CBX4-204ENST00000495122 GRIN1Q05586 938 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 DPCR1Q3MIW9 517 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 DTHD1Q6ZMT9 781 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 UBE2Q1Q7Z7E8 422 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 HOMER1Q86YM7 354 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 ADGRF4Q8IZF3 695 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 GSDMAQ96QA5 445 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 GTPBP4Q9BZE4 634 aaKnown RBP18.37■□□□□ 0.53
CBX4-204ENST00000495122 CUEDC2Q9H467 287 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 TXNRD2Q9NNW7 524 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 SERTAD1Q9UHV2 236 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 MTMR7Q9Y216 660 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 PCDHA5Q9Y5H7 936 aa18.37■□□□□ 0.53
CBX4-204ENST00000495122 VWA3AA6NCI4 1184 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 PEX10O60683 326 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 SLC1A4P43007 532 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 PLCB2Q00722 1185 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 PNOCQ13519 176 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 SLFN13Q68D06 897 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 FRMPD2Q68DX3 1309 aaPredicted RBP18.36■□□□□ 0.53
CBX4-204ENST00000495122 AOPEPQ8N6M6 819 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 CUL5Q93034 780 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 FEZ1Q99689 392 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 CCSER1Q9C0I3 900 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 SH2D4AQ9H788 454 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 ARHGEF10LQ9HCE6 1279 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 RRAGDQ9NQL2 400 aaPredicted RBP18.36■□□□□ 0.53
CBX4-204ENST00000495122 GJD2Q9UKL4 321 aa18.36■□□□□ 0.53
CBX4-204ENST00000495122 AP5Z1O43299 807 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 GCFC2P16383 781 aaKnown RBP18.35■□□□□ 0.53
CBX4-204ENST00000495122 MYL5Q02045 173 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 MORC3Q14149 939 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 ZYXQ15942 572 aaKnown RBP18.35■□□□□ 0.53
CBX4-204ENST00000495122 INF2Q27J81 1249 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 POTEEQ6S8J3 1075 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 BTNL9Q6UXG8 535 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
CBX4-204ENST00000495122 GTF3C2Q8WUA4 911 aaPredicted RBP18.35■□□□□ 0.53
CBX4-204ENST00000495122 UBA5Q9GZZ9 404 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 KIAA1683Q9H0B3 1180 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
CBX4-204ENST00000495122 PAK6Q9NQU5 681 aaPredicted RBP18.35■□□□□ 0.53
CBX4-204ENST00000495122 WNT7AO00755 349 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 SLC26A4O43511 780 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 NEMFO60524 1076 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 OR52Z1P0C646 297 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 ERCC5P28715 1186 aaPredicted RBP18.34■□□□□ 0.53
CBX4-204ENST00000495122 USP14P54578 494 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 ERVK-9P63128 1117 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 ERVK-24P63145 666 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 ATP2B2Q01814 1243 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 SEPT2Q15019 361 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 E2F4Q16254 413 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 SPECC1Q5M775 1068 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 GPRC5AQ8NFJ5 357 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 ACER1Q8TDN7 264 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 VAT1LQ9HCJ6 419 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 RBPJLQ9UBG7 517 aa18.34■□□□□ 0.53
CBX4-204ENST00000495122 CBFA2T2O43439 604 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 SGPL1O95470 568 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 HMGCRP04035 888 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 VCAM1P19320 739 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 CLK2P49760 499 aaKnown RBP18.33■□□□□ 0.52
CBX4-204ENST00000495122 PPP4R3AQ6IN85 833 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 RASGRP4Q8TDF6 673 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 DHX58Q96C10 678 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 EPSTI1Q96J88 318 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 RMND1Q9NWS8 449 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 MAN1B1Q9UKM7 699 aa18.33■□□□□ 0.52
CBX4-204ENST00000495122 USP17L15C9J2P7 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 USP17L13C9JLJ4 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 USP17L11C9JVI0 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 USP17L18D6R9N7 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 USP17L22D6RA61 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 USP17L17D6RBQ6 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 USP17L19D6RCP7 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 USP17L20D6RJB6 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 F5H6K3 240 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 GTPBP6O43824 516 aaPredicted RBP18.32■□□□□ 0.52
CBX4-204ENST00000495122 PLA2G6O60733 806 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 KLRC3Q07444 240 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 USP17L24Q0WX57 530 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 AP3B2Q13367 1082 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 RASGRP2Q7LDG7 609 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 SOCS4Q8WXH5 440 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 PAGE5Q96GU1 130 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 PAGR1Q9BTK6 254 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 RAB34Q9BZG1 259 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms