RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 RB1P06400 928 aa17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 SP100P23497 879 aaPredicted RBP17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 G3BP1Q13283 466 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 ANGPT1Q15389 498 aa17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 ADGRD2Q7Z7M1 963 aa17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 SESTD1Q86VW0 696 aa17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 FIBCD1Q8N539 461 aa17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 MORC4Q8TE76 937 aa17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 TOP1MTQ969P6 601 aa17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 PPP2R3CQ969Q6 453 aa17.47■□□□□ 0.39
CHMP2B-205ENST00000494980 SPEGQ15772 3267 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 CYP2D7A0A087X1C5 515 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 BRD1O95696 1058 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 ATF7P17544 494 aaPredicted RBP17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 BMPR1AP36894 532 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 MTX1Q13505 466 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 MTMR3Q13615 1198 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 UBALD2Q8IYN6 164 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 COPS5Q92905 334 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 WNT8BQ93098 351 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 CHAMP1Q96JM3 812 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 IFIH1Q9BYX4 1025 aaKnown RBP17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 MFSD1Q9H3U5 465 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 ANTXR1Q9H6X2 564 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 CYP39A1Q9NYL5 469 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 KIAA1671Q9BY89 1806 aa17.46■□□□□ 0.39
CHMP2B-205ENST00000494980 EMSYQ7Z589 1322 aa17.46■□□□□ 0.38
CHMP2B-205ENST00000494980 MAST4O15021 2626 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 RBM47A0AV96 593 aaKnown RBP17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 LINC00271P0C7V0 271 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 CLCN5P51795 746 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 CAMK1Q14012 370 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 PPP2R5BQ15173 497 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 CYP2W1Q8TAV3 490 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 SUSD6Q92537 303 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 TRERF1Q96PN7 1200 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 SEMA4AQ9H3S1 761 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 SMOC2Q9H3U7 446 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 FEM1BQ9UK73 627 aa17.45■□□□□ 0.38
CHMP2B-205ENST00000494980 FANCMQ8IYD8 2048 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 ALAS1P13196 640 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 NRIP1P48552 1158 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 TMED8Q6PL24 325 aaPredicted RBP17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 C16orf86Q6ZW13 317 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 LCORLQ8N3X6 602 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 HAUS7Q99871 368 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 GTF2IRD1Q9UHL9 959 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 SORCS3Q9UPU3 1222 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 RWDD3Q9Y3V2 267 aa17.44■□□□□ 0.38
CHMP2B-205ENST00000494980 DCLK2Q8N568 766 aa17.43■□□□□ 0.38
CHMP2B-205ENST00000494980 IL17RAQ96F46 866 aa17.43■□□□□ 0.38
CHMP2B-205ENST00000494980 GPR108Q9NPR9 543 aa17.43■□□□□ 0.38
CHMP2B-205ENST00000494980 R4GN57 208 aa17.43■□□□□ 0.38
CHMP2B-205ENST00000494980 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 PTK7Q13308 1070 aa17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 CCDC184Q52MB2 194 aa17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 PLEKHG4Q58EX7 1191 aa17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 MUM1L1Q5H9M0 696 aa17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 KIAA0319Q5VV43 1072 aa17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 CWF19L1Q69YN2 538 aaKnown RBP17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 NSMFQ6X4W1 530 aa17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 RBM23Q86U06 439 aaKnown RBP17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 CCDC105Q8IYK2 499 aa17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 LRRC47Q8N1G4 583 aaKnown RBP17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 FLCNQ8NFG4 579 aa17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 DBNLQ9UJU6 430 aaKnown RBP17.42■□□□□ 0.38
CHMP2B-205ENST00000494980 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 ARP10275 920 aa17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 DNAJB1P25685 340 aa17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 ALDH5A1P51649 535 aaPredicted RBP17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 TKFCQ3LXA3 575 aa17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 C12orf60Q5U649 245 aa17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 RUBCNQ92622 972 aa17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 KAT2BQ92831 832 aa17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 HDAC6Q9UBN7 1215 aa17.41■□□□□ 0.38
CHMP2B-205ENST00000494980 KCNA4P22459 653 aa17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 RBM10P98175 930 aaKnown RBP17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 PDE4BQ07343 736 aa17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 C7orf31Q8N865 590 aa17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 CLP1Q92989 425 aaKnown RBP17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 NYAP2Q9P242 653 aa17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 ADD3Q9UEY8 706 aaKnown RBP17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 PLAGL2Q9UPG8 496 aa17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 ADGRA3Q8IWK6 1321 aa17.4■□□□□ 0.38
CHMP2B-205ENST00000494980 PLXNA4Q9HCM2 1894 aa17.39■□□□□ 0.38
CHMP2B-205ENST00000494980 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
CHMP2B-205ENST00000494980 ASH1LQ9NR48 2969 aaKnown RBP17.39■□□□□ 0.37
CHMP2B-205ENST00000494980 PNMA6EA0A0J9YXQ4 647 aa17.39■□□□□ 0.37
CHMP2B-205ENST00000494980 PI15O43692 258 aa17.39■□□□□ 0.37
CHMP2B-205ENST00000494980 PRKAB2O43741 272 aa17.39■□□□□ 0.37
CHMP2B-205ENST00000494980 FDX1P10109 184 aa17.39■□□□□ 0.37
CHMP2B-205ENST00000494980 PDE6AP16499 860 aa17.39■□□□□ 0.37
CHMP2B-205ENST00000494980 ATXN1P54253 815 aaKnown RBP17.39■□□□□ 0.37
CHMP2B-205ENST00000494980 DTWD2Q8NBA8 298 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms