RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 MMP19Q99542 508 aa7.34□□□□□ -1.23
SRRM1-218ENST00000494934 SMAD5Q99717 465 aaKnown RBP7.34□□□□□ -1.23
SRRM1-218ENST00000494934 CDADC1Q9BWV3 514 aa7.34□□□□□ -1.23
SRRM1-218ENST00000494934 IPPKQ9H8X2 491 aa7.34□□□□□ -1.23
SRRM1-218ENST00000494934 SP110Q9HB58 689 aa7.34□□□□□ -1.23
SRRM1-218ENST00000494934 SLC5A4Q9NY91 659 aa7.34□□□□□ -1.23
SRRM1-218ENST00000494934 MECP2P51608 486 aaKnown RBP7.33□□□□□ -1.24
SRRM1-218ENST00000494934 LAPTM5Q13571 262 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 ZNF792Q3KQV3 632 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 TMEM177Q53S58 311 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 RNF219Q5W0B1 726 aaPredicted RBP7.33□□□□□ -1.24
SRRM1-218ENST00000494934 SLC23A3Q6PIS1 610 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 NLRP10Q86W26 655 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 TP53INP2Q8IXH6 220 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 SMC1BQ8NDV3 1235 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 TMEM52Q8NDY8 209 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 OR2W6PQ8NHA6 318 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 TTC1Q99614 292 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 CELF4Q9BZC1 486 aaKnown RBP7.33□□□□□ -1.24
SRRM1-218ENST00000494934 ADAMTS10Q9H324 1103 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 IFT22Q9H7X7 185 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.33□□□□□ -1.24
SRRM1-218ENST00000494934 ERVK13-1Q9NX77 482 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 PCDHA2Q9Y5H9 948 aa7.33□□□□□ -1.24
SRRM1-218ENST00000494934 BRINP1O60477 761 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 F2P00734 622 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 SOD2P04179 222 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 ZGLP1P0C6A0 271 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 CPEP16870 476 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 YBX3P16989 372 aaKnown RBP eCLIP7.32□□□□□ -1.24
SRRM1-218ENST00000494934 LTKP29376 864 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 MCL1Q07820 350 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 PAK1Q13153 545 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 LRRC41Q15345 812 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 CREB3L3Q68CJ9 461 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 CISD2Q8N5K1 135 aaKnown RBP7.32□□□□□ -1.24
SRRM1-218ENST00000494934 LINC01599Q8WXQ3 324 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 TSR2Q969E8 191 aaKnown RBP7.32□□□□□ -1.24
SRRM1-218ENST00000494934 CDIP1Q9H305 208 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 ADGRE2Q9UHX3 823 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 CBLCQ9ULV8 474 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 APOBEC2Q9Y235 224 aaKnown RBP7.32□□□□□ -1.24
SRRM1-218ENST00000494934 FAN1Q9Y2M0 1017 aa7.32□□□□□ -1.24
SRRM1-218ENST00000494934 CCDC66A2RUB6 948 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 NOTOA8MTQ0 251 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 WNT9AO14904 365 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 EFEMP2O95967 443 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 PYGMP11217 842 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 NAT1P18440 290 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 GRK2P25098 689 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 GRK3P35626 688 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 PLCL1Q15111 1095 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 KIZQ2M2Z5 673 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 OVCH1Q7RTY7 1134 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 KIF18BQ86Y91 864 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 CNTD1Q8N815 330 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 CHST14Q8NCH0 376 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 AGBL5Q8NDL9 886 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 DPF3Q92784 378 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 ALPK1Q96QP1 1244 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 ALG1Q9BT22 464 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 SLAMF8Q9P0V8 285 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 TRHDEQ9UKU6 1024 aa7.31□□□□□ -1.24
SRRM1-218ENST00000494934 C7orf72A4D263 438 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 ATP2A2P16615 1042 aaKnown RBP7.3□□□□□ -1.24
SRRM1-218ENST00000494934 BCL6P41182 706 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 DNM2P50570 870 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 ITKQ08881 620 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 NFE2Q16621 373 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-218ENST00000494934 CCDC181Q5TID7 509 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 IQCEQ6IPM2 695 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 FSTL4Q6MZW2 842 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 CHTF18Q8WVB6 975 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 GPR101Q96P66 508 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-218ENST00000494934 VTA1Q9NP79 307 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 THG1LQ9NWX6 298 aaKnown RBP7.3□□□□□ -1.24
SRRM1-218ENST00000494934 H2AFY2Q9P0M6 372 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-218ENST00000494934 B4GALT6Q9UBX8 382 aa7.3□□□□□ -1.24
SRRM1-218ENST00000494934 SSU72P8A0A1W2PR75 194 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 SHTN1A0MZ66 631 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 GABRDO14764 452 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 ZEB2O60315 1214 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 PRKD3O94806 890 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 FKBP9O95302 570 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 SCNN1BP51168 640 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 NEK2P51955 445 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 ERVFC1P60507 584 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 IL2P60568 153 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 HSP90AB2PQ58FF8 381 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 FKBP9P1Q75LS8 142 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 NAT16Q8N8M0 369 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 EMC7Q9NPA0 242 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 SPTLC3Q9NUV7 552 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 SLC52A1Q9NWF4 448 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 TMEM59LQ9UK28 342 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 CTNND2Q9UQB3 1225 aa7.29□□□□□ -1.24
SRRM1-218ENST00000494934 LOC100996750A0A140TA64 210 aa7.28□□□□□ -1.24
SRRM1-218ENST00000494934 SCGB1D2O95969 90 aa7.28□□□□□ -1.24
SRRM1-218ENST00000494934 RPL10P27635 214 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms