RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 FAM169AQ9Y6X4 670 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 PVALEFA0A1B0GWK0 134 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 SSU72P8A0A1W2PR75 194 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 USP17L3A6NCW0 530 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 USP17L4A6NCW7 530 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 ANKRD65E5RJM6 399 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 FCER1AP12319 257 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 C8orf74Q6P047 294 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 NFRKBQ6P4R8 1299 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 MMS22LQ6ZRQ5 1243 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 USP17L1Q7RTZ2 530 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 HEATR3Q7Z4Q2 680 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 SPATS2Q86XZ4 545 aaKnown RBP13.17□□□□□ -0.3
TRIM2-209ENST00000494872 KIAA0895Q8NCT3 520 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 ANKIB1Q9P2G1 1089 aa13.17□□□□□ -0.3
TRIM2-209ENST00000494872 PALM3A6NDB9 673 aaPredicted RBP13.16□□□□□ -0.3
TRIM2-209ENST00000494872 ERLIN2O94905 339 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 MAGEA1P43355 309 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 GRAPQ13588 217 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM2-209ENST00000494872 MICALL1Q8N3F8 863 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
TRIM2-209ENST00000494872 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 NOX5Q96PH1 765 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 GUCY2CP25092 1073 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 LRRC63Q05C16 580 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 ASTE1Q2TB18 679 aaPredicted RBP13.16□□□□□ -0.3
TRIM2-209ENST00000494872 CFAP221Q4G0U5 840 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.16□□□□□ -0.3
TRIM2-209ENST00000494872 B4GALNT4Q76KP1 1039 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 IFT20Q8IY31 132 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 TGFBRAP1Q8WUH2 860 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
TRIM2-209ENST00000494872 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 STK17AQ9UEE5 414 aa13.16□□□□□ -0.3
TRIM2-209ENST00000494872 RBAK-RBAKDNI3L0D1 243 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 CYTH3O43739 400 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 ZEB2O60315 1214 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 SLC7A5Q01650 507 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 SLC35G1Q2M3R5 365 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 UNC13DQ70J99 1090 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 PTF1AQ7RTS3 328 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
TRIM2-209ENST00000494872 TSEN2Q8NCE0 465 aaKnown RBP13.15□□□□□ -0.3
TRIM2-209ENST00000494872 BAP1Q92560 729 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 DRC1Q96MC2 740 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 TLR10Q9BXR5 811 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 NUCKS1Q9H1E3 243 aaKnown RBP13.15□□□□□ -0.3
TRIM2-209ENST00000494872 GDF3Q9NR23 364 aa13.15□□□□□ -0.3
TRIM2-209ENST00000494872 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
TRIM2-209ENST00000494872 LRRC53A6NM62 1247 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 EPHB6O15197 1021 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.31
TRIM2-209ENST00000494872 GNA11P29992 359 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 PAK2Q13177 524 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 VPS72Q15906 364 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 TTMPQ5BVD1 217 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 KLHDC7AQ5VTJ3 777 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 PDXDC1Q6P996 788 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.31
TRIM2-209ENST00000494872 RRAGAQ7L523 313 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 NEK8Q86SG6 692 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 MREGQ8N565 214 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 C1orf131Q8NDD1 294 aaKnown RBP13.15□□□□□ -0.31
TRIM2-209ENST00000494872 MMTAG2Q9BU76 263 aaKnown RBP13.15□□□□□ -0.31
TRIM2-209ENST00000494872 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.31
TRIM2-209ENST00000494872 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.31
TRIM2-209ENST00000494872 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
TRIM2-209ENST00000494872 RASA1P20936 1047 aa13.14□□□□□ -0.31
TRIM2-209ENST00000494872 MATR3P43243 847 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIM2-209ENST00000494872 DIXDC1Q155Q3 683 aa13.14□□□□□ -0.31
TRIM2-209ENST00000494872 CD302Q8IX05 232 aa13.14□□□□□ -0.31
TRIM2-209ENST00000494872 SYN2Q92777 582 aaPredicted RBP13.14□□□□□ -0.31
TRIM2-209ENST00000494872 ZIM3Q96PE6 472 aa13.14□□□□□ -0.31
TRIM2-209ENST00000494872 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
TRIM2-209ENST00000494872 SLC39A2Q9NP94 309 aa13.14□□□□□ -0.31
TRIM2-209ENST00000494872 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
TRIM2-209ENST00000494872 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
TRIM2-209ENST00000494872 KLRF2D3W0D1 207 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 GRIK5Q16478 980 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 LETM2Q2VYF4 491 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 SWT1Q5T5J6 900 aaKnown RBP13.13□□□□□ -0.31
TRIM2-209ENST00000494872 KDM7AQ6ZMT4 941 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 IQCKQ8N0W5 287 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 ARL8AQ96BM9 186 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 LRRC27Q9C0I9 530 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 RIC8AQ9NPQ8 531 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 RBM12Q9NTZ6 932 aaKnown RBP13.13□□□□□ -0.31
TRIM2-209ENST00000494872 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms