RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
SDF4-207ENST00000494748 ATP2B2Q01814 1243 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 GUCY2DQ02846 1103 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 ACTN3Q08043 901 aaPredicted RBP16.99■□□□□ 0.31
SDF4-207ENST00000494748 CFAP58Q5T655 872 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 LRRC55Q6ZSA7 311 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 NLRP14Q86W24 1093 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 RNF10Q8N5U6 811 aaKnown RBP16.99■□□□□ 0.31
SDF4-207ENST00000494748 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
SDF4-207ENST00000494748 CHRM1P11229 460 aaPredicted RBP16.99■□□□□ 0.31
SDF4-207ENST00000494748 PAFAH1B1P43034 410 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 ASIC1P78348 528 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 RASSF8Q8NHQ8 419 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 TMEM59LQ9UK28 342 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 ABCB11O95342 1321 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 SRRM3A6NNA2 597 aaPredicted RBP16.99■□□□□ 0.31
SDF4-207ENST00000494748 H0YGN5 161 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 AKR1B10O60218 316 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 MMP14P50281 582 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 SPRED3Q2MJR0 410 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 CFAP221Q4G0U5 840 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 NFS1Q9Y697 457 aa16.99■□□□□ 0.31
SDF4-207ENST00000494748 CCDC194A0A1B0GVG4 234 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 SSU72P8A0A1W2PR75 194 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 NOL4O94818 638 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
SDF4-207ENST00000494748 HSPA9P38646 679 aaKnown RBP16.98■□□□□ 0.31
SDF4-207ENST00000494748 PAK2Q13177 524 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 MAN2A1Q16706 1144 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
SDF4-207ENST00000494748 SLC39A2Q9NP94 309 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 GUCY2FP51841 1108 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 AK8Q96MA6 479 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 NOX5Q96PH1 765 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 CD248Q9HCU0 757 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 RNF14Q9UBS8 474 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 KAT6BQ8WYB5 2073 aa16.98■□□□□ 0.31
SDF4-207ENST00000494748 FAM107AO95990 144 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 USP8P40818 1118 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 PPP1R2P41236 205 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 NSUN4Q96CB9 384 aaKnown RBP16.97■□□□□ 0.31
SDF4-207ENST00000494748 TMBIM4Q9HC24 238 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 BLOC1S4Q9NUP1 217 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 MAP2K2P36507 400 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 GRM4Q14833 912 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 MEI1Q5TIA1 1274 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 CCDC13Q8IYE1 715 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 MMRN2Q9H8L6 949 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 PALMO75781 387 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
SDF4-207ENST00000494748 UAP1Q16222 522 aaPredicted RBP16.97■□□□□ 0.31
SDF4-207ENST00000494748 CDC37Q16543 378 aaPredicted RBP16.97■□□□□ 0.31
SDF4-207ENST00000494748 IFT81Q8WYA0 676 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 BARHL2Q9NY43 387 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 SLC12A6Q9UHW9 1150 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 TSKSQ9UJT2 592 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 PCDHGC5Q9Y5F6 944 aa16.97■□□□□ 0.31
SDF4-207ENST00000494748 NTSR2O95665 410 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 PSEN1P49768 467 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 SMTNP53814 917 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 CCDC152Q4G0S7 254 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 GRID2IPA4D2P6 1211 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 HMGB1P1B2RPK0 211 aaPredicted RBP16.96■□□□□ 0.31
SDF4-207ENST00000494748 RAD51CO43502 376 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 KIAA0754O94854 1291 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 OR52Z1P0C646 297 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 ZBTB48P10074 688 aaPredicted RBP16.96■□□□□ 0.31
SDF4-207ENST00000494748 KIF5BP33176 963 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 BYSLQ13895 437 aaKnown RBP16.96■□□□□ 0.31
SDF4-207ENST00000494748 PLCB4Q15147 1175 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 NAB2Q15742 525 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 CNNM4Q6P4Q7 775 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 ANKS1AQ92625 1134 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 KRT12Q99456 494 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 MYMKA6NI61 221 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 ZPR1O75312 459 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 EHHADHQ08426 723 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 SBK1Q52WX2 424 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 GLIS3Q8NEA6 775 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 WHAMMQ8TF30 809 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 JPH2Q9BR39 696 aaPredicted RBP16.96■□□□□ 0.31
SDF4-207ENST00000494748 PLCB1Q9NQ66 1216 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 PLAAQ9Y263 795 aa16.96■□□□□ 0.31
SDF4-207ENST00000494748 FTCDO95954 541 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 KLRC1P26715 233 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 GRB10Q13322 594 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 PPP4R3AQ6IN85 833 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
SDF4-207ENST00000494748 PAXIP1Q6ZW49 1069 aaPredicted RBP16.95■□□□□ 0.3
SDF4-207ENST00000494748 PACSIN2Q9UNF0 486 aaPredicted RBP16.95■□□□□ 0.3
SDF4-207ENST00000494748 ERVK-9P63128 1117 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 CCDC84Q86UT8 332 aaPredicted RBP16.95■□□□□ 0.3
SDF4-207ENST00000494748 MECOMQ03112 1051 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 PNMA1Q8ND90 353 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 CYFIP2Q96F07 1278 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 FAM84BQ96KN1 310 aaPredicted RBP16.95■□□□□ 0.3
SDF4-207ENST00000494748 PNMA5Q96PV4 448 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms