RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 SLC35F1Q5T1Q4 408 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 TTLL10Q6ZVT0 673 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 CCDC103Q8IW40 242 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 LRRC47Q8N1G4 583 aaKnown RBP4.97□□□□□ -1.61
CLHC1-213ENST00000494539 LINC01356Q8N9X3 169 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 TRMT2BQ96GJ1 504 aaKnown RBP4.97□□□□□ -1.61
CLHC1-213ENST00000494539 TMEM169Q96HH4 297 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 AARSD1Q9BTE6 412 aaKnown RBP4.97□□□□□ -1.61
CLHC1-213ENST00000494539 IER2Q9BTL4 223 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 ZCCHC4Q9H5U6 513 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 RXFP1Q9HBX9 757 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 PCDH18Q9HCL0 1135 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 PMF1-BGLAPU3KQ54 211 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 X6R8D5 127 aa4.97□□□□□ -1.61
CLHC1-213ENST00000494539 SASH1O94885 1247 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 CAPNS1P04632 268 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 INHBBP09529 407 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 ATF2P15336 505 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 FPR2P25090 351 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 BCL6P41182 706 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 FOXO4P98177 505 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 CACNB2Q08289 660 aaPredicted RBP4.96□□□□□ -1.62
CLHC1-213ENST00000494539 LSAMPQ13449 338 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 RSPO2Q6UXX9 243 aaPredicted RBP4.96□□□□□ -1.62
CLHC1-213ENST00000494539 CEP68Q76N32 757 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 RCBTB1Q8NDN9 531 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 C1orf159Q96HA4 380 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 PARD6AQ9NPB6 346 aa4.96□□□□□ -1.62
CLHC1-213ENST00000494539 TMEFF2Q9UIK5 374 aaPredicted RBP4.96□□□□□ -1.62
CLHC1-213ENST00000494539 TRIM13O60858 407 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 CYP2C8P10632 490 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 FGFR1P11362 822 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 BMP7P18075 431 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 SOGA3Q5TF21 947 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 ETV3LQ6ZN32 361 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 DPH6Q7L8W6 267 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 ZC3H18Q86VM9 953 aaKnown RBP4.95□□□□□ -1.62
CLHC1-213ENST00000494539 NLRP10Q86W26 655 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 MARCH10Q8NA82 808 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-213ENST00000494539 CHAMP1Q96JM3 812 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 DRC1Q96MC2 740 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 KCNC2Q96PR1 638 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 EPB41L1Q9H4G0 881 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 NGRNQ9NPE2 291 aaKnown RBP4.95□□□□□ -1.62
CLHC1-213ENST00000494539 GPR27Q9NS67 375 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 CLDND1Q9NY35 253 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 PLA2G2DQ9UNK4 145 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 SIT1Q9Y3P8 196 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 PCDHA2Q9Y5H9 948 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 NPFFR2Q9Y5X5 522 aa4.95□□□□□ -1.62
CLHC1-213ENST00000494539 TRAV20A0A0B4J274 112 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 DLX3O60479 287 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 MAFKO60675 156 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 DGKIO75912 1065 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 MC3RP41968 323 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 GRIA2P42262 883 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 HTRA3P83110 453 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 RASGRF1Q13972 1273 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 DENND5AQ6IQ26 1287 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 USP53Q70EK8 1073 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 MIB1Q86YT6 1006 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 SMARCC2Q8TAQ2 1214 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 FNIP1Q8TF40 1166 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 DCAF4Q8WV16 495 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 DDX11Q96FC9 970 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 YIPF4Q9BSR8 244 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 BCAS3Q9H6U6 928 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 LUC7LQ9NQ29 371 aaKnown RBP4.94□□□□□ -1.62
CLHC1-213ENST00000494539 ARHGEF4Q9NR80 690 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 SIRPGQ9P1W8 387 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 PALD1Q9ULE6 856 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 ZNF652Q9Y2D9 606 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 MSRB2Q9Y3D2 182 aa4.94□□□□□ -1.62
CLHC1-213ENST00000494539 ARNTLO00327 626 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 HGSO14964 777 aaPredicted RBP4.93□□□□□ -1.62
CLHC1-213ENST00000494539 PDPK1O15530 556 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 SGSM2O43147 1006 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 PRODHO43272 600 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 PABPC1P11940 636 aaKnown RBP4.93□□□□□ -1.62
CLHC1-213ENST00000494539 LCP1P13796 627 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 CTSWP56202 376 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 IFRD2Q12894 506 aaPredicted RBP4.93□□□□□ -1.62
CLHC1-213ENST00000494539 SERINC3Q13530 473 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 MTERF2Q49AM1 385 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 NSMFQ6X4W1 530 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 MILR1Q7Z6M3 343 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 SAPCD2Q86UD0 394 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 FAM126BQ8IXS8 530 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 DNAJC2Q99543 621 aaKnown RBP4.93□□□□□ -1.62
CLHC1-213ENST00000494539 ZFYVE21Q9BQ24 234 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 PHF20Q9BVI0 1012 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 CCDC113Q9H0I3 377 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 FBXL7Q9UJT9 491 aa4.93□□□□□ -1.62
CLHC1-213ENST00000494539 FFAR3O14843 346 aa4.92□□□□□ -1.62
CLHC1-213ENST00000494539 PLA2G1BP04054 148 aaKnown RBP4.92□□□□□ -1.62
CLHC1-213ENST00000494539 VMACQ2NL98 169 aa4.92□□□□□ -1.62
CLHC1-213ENST00000494539 VWA3BQ502W6 1294 aa4.92□□□□□ -1.62
CLHC1-213ENST00000494539 EMC4Q5J8M3 183 aa4.92□□□□□ -1.62
CLHC1-213ENST00000494539 STEAP3Q658P3 488 aa4.92□□□□□ -1.62
CLHC1-213ENST00000494539 PMFBP1Q8TBY8 1022 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms