RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 RCAN1P53805 252 aa25.23■■□□□ 1.63
HPS3-207ENST00000494327 PSMC6P62333 389 aa25.23■■□□□ 1.63
HPS3-207ENST00000494327 ANKRD33Q7Z3H0 272 aa25.23■■□□□ 1.63
HPS3-207ENST00000494327 TRIM43Q96BQ3 446 aaPredicted RBP25.23■■□□□ 1.63
HPS3-207ENST00000494327 ZSWIM6Q9HCJ5 1215 aa25.23■■□□□ 1.63
HPS3-207ENST00000494327 TMEM39AQ9NV64 488 aa25.23■■□□□ 1.63
HPS3-207ENST00000494327 CCDC196A0A1B0GTZ2 297 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 MEIS2O14770 477 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 GH1P01241 217 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 CDK7P50613 346 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 FAAP100Q0VG06 881 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 FUT2Q10981 343 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 ITGA7Q13683 1181 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 TOX2Q96NM4 488 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 UPF3BQ9BZI7 483 aaKnown RBP25.22■■□□□ 1.63
HPS3-207ENST00000494327 POLR3EQ9NVU0 708 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 DDX41Q9UJV9 622 aaKnown RBP25.22■■□□□ 1.63
HPS3-207ENST00000494327 DNAH12Q6ZR08 3092 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 CEP290O15078 2479 aa25.22■■□□□ 1.63
HPS3-207ENST00000494327 MROH7Q68CQ1 1323 aa25.21■■□□□ 1.63
HPS3-207ENST00000494327 RGS20O76081 388 aa25.21■■□□□ 1.63
HPS3-207ENST00000494327 BMP8BP34820 402 aa25.21■■□□□ 1.63
HPS3-207ENST00000494327 WWC2Q6AWC2 1192 aa25.21■■□□□ 1.63
HPS3-207ENST00000494327 FBXL16Q8N461 479 aa25.21■■□□□ 1.63
HPS3-207ENST00000494327 AGXT2Q9BYV1 514 aa25.21■■□□□ 1.63
HPS3-207ENST00000494327 PIK3CDO00329 1044 aa25.2■■□□□ 1.62
HPS3-207ENST00000494327 SORBS3O60504 671 aa25.2■■□□□ 1.62
HPS3-207ENST00000494327 NAPAP54920 295 aa25.2■■□□□ 1.62
HPS3-207ENST00000494327 UBE2SQ16763 222 aa25.2■■□□□ 1.62
HPS3-207ENST00000494327 AFG1LQ8WV93 481 aa25.2■■□□□ 1.62
HPS3-207ENST00000494327 BADQ92934 168 aa25.2■■□□□ 1.62
HPS3-207ENST00000494327 LARP6Q9BRS8 491 aaKnown RBP25.2■■□□□ 1.62
HPS3-207ENST00000494327 RTEL1Q9NZ71 1219 aa25.2■■□□□ 1.62
HPS3-207ENST00000494327 A6NJR5 290 aa25.19■■□□□ 1.62
HPS3-207ENST00000494327 TLR3O15455 904 aaKnown RBP25.19■■□□□ 1.62
HPS3-207ENST00000494327 RAG1P15918 1043 aa25.19■■□□□ 1.62
HPS3-207ENST00000494327 PURAQ00577 322 aaKnown RBP25.19■■□□□ 1.62
HPS3-207ENST00000494327 ARHGAP1Q07960 439 aa25.19■■□□□ 1.62
HPS3-207ENST00000494327 MTG1Q9BT17 334 aaPredicted RBP25.19■■□□□ 1.62
HPS3-207ENST00000494327 TM6SF1Q9BZW5 370 aa25.19■■□□□ 1.62
HPS3-207ENST00000494327 GRIN2DO15399 1336 aa25.18■■□□□ 1.62
HPS3-207ENST00000494327 CHMP4BP1P59074 171 aa25.18■■□□□ 1.62
HPS3-207ENST00000494327 CCT2P78371 535 aaKnown RBP25.18■■□□□ 1.62
HPS3-207ENST00000494327 MRPS9P82933 396 aaKnown RBP25.18■■□□□ 1.62
HPS3-207ENST00000494327 TOB2Q14106 344 aaPredicted RBP25.18■■□□□ 1.62
HPS3-207ENST00000494327 DHX37Q8IY37 1157 aaKnown RBP25.18■■□□□ 1.62
HPS3-207ENST00000494327 PDRG1Q9NUG6 133 aa25.18■■□□□ 1.62
HPS3-207ENST00000494327 A0A1W2PPC1 479 aa25.17■■□□□ 1.62
HPS3-207ENST00000494327 KIAA0355O15063 1070 aa25.17■■□□□ 1.62
HPS3-207ENST00000494327 ITGB8P26012 769 aa25.17■■□□□ 1.62
HPS3-207ENST00000494327 PDIA3P30101 505 aaKnown RBP25.17■■□□□ 1.62
HPS3-207ENST00000494327 TYW1BQ6NUM6 668 aa25.17■■□□□ 1.62
HPS3-207ENST00000494327 KCNV1Q6PIU1 500 aa25.17■■□□□ 1.62
HPS3-207ENST00000494327 FAM126BQ8IXS8 530 aa25.17■■□□□ 1.62
HPS3-207ENST00000494327 SLC43A3Q8NBI5 491 aa25.17■■□□□ 1.62
HPS3-207ENST00000494327 FRMPD4Q14CM0 1322 aa25.16■■□□□ 1.62
HPS3-207ENST00000494327 SPDYE3A6NKU9 549 aa25.16■■□□□ 1.62
HPS3-207ENST00000494327 KPNA6O60684 536 aa25.16■■□□□ 1.62
HPS3-207ENST00000494327 PPFIA3O75145 1194 aa25.16■■□□□ 1.62
HPS3-207ENST00000494327 MMP3P08254 477 aa25.16■■□□□ 1.62
HPS3-207ENST00000494327 FXR1P51114 621 aaKnown RBP eCLIP25.16■■□□□ 1.62
HPS3-207ENST00000494327 LAMC2Q13753 1193 aa25.16■■□□□ 1.62
HPS3-207ENST00000494327 PPP1R13LQ8WUF5 828 aa25.16■■□□□ 1.62
HPS3-207ENST00000494327 NCOA5Q9HCD5 579 aaKnown RBP25.16■■□□□ 1.62
HPS3-207ENST00000494327 STXBP3O00186 592 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 GGPS1O95749 300 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 SP2Q02086 613 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 GNPTABQ3T906 1256 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 PCNX4Q63HM2 1172 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 TDHQ8IZJ6 230 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 PHKBQ93100 1093 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 TRPV6Q9H1D0 765 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 BARHL2Q9NY43 387 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 PCDHA6Q9UN73 950 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 PCDHA8Q9Y5H6 950 aa25.15■■□□□ 1.62
HPS3-207ENST00000494327 SMCO2A6NFE2 343 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 hCG_1984214I3L0E3 225 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 STAM2O75886 525 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 ADCY7P51828 1080 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 EVCP57679 992 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 AKAP17AQ02040 695 aaKnown RBP25.14■■□□□ 1.62
HPS3-207ENST00000494327 PFKFB3Q16875 520 aaPredicted RBP25.14■■□□□ 1.62
HPS3-207ENST00000494327 FAM47CQ5HY64 1035 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 ZNF713Q8N859 430 aaPredicted RBP25.14■■□□□ 1.62
HPS3-207ENST00000494327 MLXIPQ9HAP2 919 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 RIC8AQ9NPQ8 531 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 TBX21Q9UL17 535 aa25.14■■□□□ 1.62
HPS3-207ENST00000494327 PRPF3O43395 683 aaKnown RBP25.13■■□□□ 1.61
HPS3-207ENST00000494327 CD4P01730 458 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 TGFB3P10600 412 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 SCG2P13521 617 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 UBA1P22314 1058 aaKnown RBP25.13■■□□□ 1.61
HPS3-207ENST00000494327 STK3Q13188 491 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 DGKDQ16760 1214 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 NBPF20Q3BBV1 942 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 CELF3Q5SZQ8 465 aaKnown RBP25.13■■□□□ 1.61
HPS3-207ENST00000494327 PPP1R18Q6NYC8 613 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 SPATA33Q96N06 139 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 INPP4AQ96PE3 977 aaPredicted RBP25.13■■□□□ 1.61
HPS3-207ENST00000494327 SLC26A6Q9BXS9 759 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms