RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 HEATR3Q7Z4Q2 680 aa8.35□□□□□ -1.07
RBM39-239ENST00000494274 VSIG10LQ86VR7 867 aa8.35□□□□□ -1.07
RBM39-239ENST00000494274 SGMS1Q86VZ5 419 aa8.35□□□□□ -1.07
RBM39-239ENST00000494274 DHX37Q8IY37 1157 aaKnown RBP8.35□□□□□ -1.07
RBM39-239ENST00000494274 SAMD3Q8N6K7 520 aa8.35□□□□□ -1.07
RBM39-239ENST00000494274 AFG1LQ8WV93 481 aa8.35□□□□□ -1.07
RBM39-239ENST00000494274 MTG1Q9BT17 334 aaPredicted RBP8.35□□□□□ -1.07
RBM39-239ENST00000494274 PSTPIP2Q9H939 334 aa8.35□□□□□ -1.07
RBM39-239ENST00000494274 DDX41Q9UJV9 622 aaKnown RBP8.35□□□□□ -1.07
RBM39-239ENST00000494274 SNX14Q9Y5W7 946 aa8.35□□□□□ -1.07
RBM39-239ENST00000494274 V9GY48 417 aaPredicted RBP8.35□□□□□ -1.07
RBM39-239ENST00000494274 A6NJR5 290 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 KPNA6O60684 536 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 RGS20O76081 388 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 TIMP1P01033 207 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 CASTP20810 708 aaKnown RBP8.34□□□□□ -1.07
RBM39-239ENST00000494274 CYP2C18P33260 490 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
RBM39-239ENST00000494274 EPHB4P54760 987 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 GHRHRQ02643 423 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 FPGSQ05932 587 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 APOBRQ0VD83 1088 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 LAMC2Q13753 1193 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 NBPF20Q3BBV1 942 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 LRIT3Q3SXY7 679 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 C9orf50Q5SZB4 431 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 Q6ZUG5 572 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 FAM126BQ8IXS8 530 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 SLC43A3Q8NBI5 491 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 IL31RAQ8NI17 732 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.072e-7■■□□□ 13.3
RBM39-239ENST00000494274 BRF1Q92994 677 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 TRMT13Q9NUP7 481 aaKnown RBP8.34□□□□□ -1.07
RBM39-239ENST00000494274 RBM28Q9NW13 759 aaKnown RBP8.34□□□□□ -1.07
RBM39-239ENST00000494274 TBX21Q9UL17 535 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 MYH4Q9Y623 1939 aa8.34□□□□□ -1.07
RBM39-239ENST00000494274 MEIS2O14770 477 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 B4GALT4O60513 344 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 PPFIA3O75145 1194 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 GGPS1O95749 300 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 CD4P01730 458 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 MMP3P08254 477 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 ACRP10323 421 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 CYP2C9P11712 490 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 CSF2RAP15509 400 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 RPS6KB1P23443 525 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 CDC27P30260 824 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 METAP2P50579 478 aaKnown RBP eCLIP8.33□□□□□ -1.08
RBM39-239ENST00000494274 NAPAP54920 295 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 CCL23P55773 120 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 SP2Q02086 613 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 ARHGAP1Q07960 439 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 DGKDQ16760 1214 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 UBE2SQ16763 222 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 MFSD5Q6N075 450 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 KCNV1Q6PIU1 500 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 TMEM199Q8N511 208 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 KCNB2Q92953 911 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 SPATA33Q96N06 139 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 USP26Q9BXU7 913 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 SEZ6LQ9BYH1 1024 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 ALDH8A1Q9H2A2 487 aaPredicted RBP8.33□□□□□ -1.08
RBM39-239ENST00000494274 HIPK3Q9H422 1215 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 MLXIPQ9HAP2 919 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 NOD1Q9Y239 953 aa8.33□□□□□ -1.08
RBM39-239ENST00000494274 COL11A1P12107 1806 aaPredicted RBP8.33□□□□□ -1.08
RBM39-239ENST00000494274 UMODL1Q5DID0 1318 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 CCDC196A0A1B0GTZ2 297 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 SPDYE3A6NKU9 549 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 SUPT20HL2P0C7V6 817 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 TGFB3P10600 412 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 CCT2P78371 535 aaKnown RBP8.32□□□□□ -1.08
RBM39-239ENST00000494274 MRPS9P82933 396 aaKnown RBP8.32□□□□□ -1.08
RBM39-239ENST00000494274 SP4Q02446 784 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 GNPTABQ3T906 1256 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 CELF3Q5SZQ8 465 aaKnown RBP8.32□□□□□ -1.08
RBM39-239ENST00000494274 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 WWC2Q6AWC2 1192 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 Q7L0L9 218 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 NLRX1Q86UT6 975 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 RNPC3Q96LT9 517 aaKnown RBP8.32□□□□□ -1.08
RBM39-239ENST00000494274 LARP6Q9BRS8 491 aaKnown RBP8.32□□□□□ -1.08
RBM39-239ENST00000494274 ALG1Q9BT22 464 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 BCAS3Q9H6U6 928 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 FAM217BQ9NTX9 383 aaPredicted RBP8.32□□□□□ -1.08
RBM39-239ENST00000494274 PCDHA6Q9UN73 950 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 PCDHA8Q9Y5H6 950 aa8.32□□□□□ -1.08
RBM39-239ENST00000494274 CEP290O15078 2479 aa8.31□□□□□ -1.08
RBM39-239ENST00000494274 SMCO2A6NFE2 343 aa8.31□□□□□ -1.08
RBM39-239ENST00000494274 SPATA31C2B4DYI2 1134 aa8.31□□□□□ -1.08
RBM39-239ENST00000494274 PIK3CDO00329 1044 aa8.31□□□□□ -1.08
RBM39-239ENST00000494274 NOP56O00567 594 aaKnown RBP8.31□□□□□ -1.08
RBM39-239ENST00000494274 PPFIA4O75335 1185 aa8.31□□□□□ -1.08
RBM39-239ENST00000494274 FGBP02675 491 aa8.31□□□□□ -1.08
RBM39-239ENST00000494274 UBA1P22314 1058 aaKnown RBP8.31□□□□□ -1.08
RBM39-239ENST00000494274 PSEN2P49810 448 aa8.31□□□□□ -1.08
RBM39-239ENST00000494274 AKAP17AQ02040 695 aaKnown RBP8.31□□□□□ -1.08
RBM39-239ENST00000494274 FUT2Q10981 343 aa8.31□□□□□ -1.08
RBM39-239ENST00000494274 PPIGQ13427 754 aaKnown RBP eCLIP8.31□□□□□ -1.084e-24■□□□□ 11.3
RBM39-239ENST00000494274 PTGISQ16647 500 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms